Table 3.
Frequency of covariates appearing in RIM_minP model selection among 683 DE genes detected by maxP method under threshold FDR = 15%
| MD1_ACC | MD2_ACC | MD3_ACC | MD1_AMY | MD3_AMY | Rank average | |
|---|---|---|---|---|---|---|
| Age | 142(5) | 213 (4) | 205 (4) | 173 (3) | 218 (3) | 3.6 |
| Alcohol | 299 (2) | 279 (2) | 221 (3) | 368 (1) | 195 (4) | 2.4 |
| Antidepressant | 348 (1) | 119 (6) | 271 (2) | 346 (2) | 362 (1) | 2.4 |
| pH | 208 (3) | 150 (4) | 116 (6) | 108 (6) | 86 (6) | 5 |
| PMI | 93 (6) | 120 (5) | 141 (5) | 133 (5) | 120 (5) | 5.2 |
| Suicide | 150 (4) | 325 (1) | 340 (1) | 149 (4) | 322 (2) | 2.4 |
Rank is shown in parentheses and rank average of each covariate is calculated to indicate relative degree of frequency that a covariate impacts gene expressions and confounds with disease effect.