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. 2012 May 2;7(5):e36623. doi: 10.1371/journal.pone.0036623

Table 1. Oligonucleotide primers used for RT-PCR, RACE and diagnostic PCR.

Primer name Sequence (5′ to 3′)* Description
258.RYRF13 TGGTGGACNGTNCAYCCNGC (WWTVHPA) RT-PCR product P1
127.RYRR1 TCCATYTTNCCYTCYTCRTG (HEEGKMD)
279.H2.2F2 TGGGCAAAGTGGAGGAGAAG RT-PCR product P2
280.A1.1R1 CTCACTGTCTCCGAAGCCGT
139.RYRF7 GARAAYACNCAYAAYYTNTGG (ENTHNLW) RT-PCR product P3
141.RYRR7 TCCCARTTNGCYTTYTCCAT(MEKANWE)
303.A1.1F1 GATACTCCACCTTGCCTG RT-PCR product P4
143.RYRR8 TCRTTYTTRCANACYTCCAT(MEVCKNE)
327.K3.9F1: TGCGGCAAGGCTTCTATGAC RT-PCR product P5
302.J1.6R1 CCATCAGACTGGAGTAAGCG
290.RYRF14 GCNATGTTYGAYCAYTTYGA(AMFDHFD) RT-PCR product P6
257.RYRR13 TCNCCRTTNACCCANACRCA(CVWVNGE)
296.J1.6F1 GCAACTCGGAGCTGGTAG RT-PCR product P7
239.A2.7R CCCGTACACCCAACCATTCT
146.RYRF10 GARCAYTAYCAYGAYGCNTGG(EHYHDAW) RT-PCR product P8
147.RYRR10 GCNACCATYTCYTTYTCYTT(KEKEMVA)
238.A2.7F1 CGCATCGCAACTACTTCATA RT-PCR product P9
235.A3.7R1 CCACAACTGTAGTGACTCTGCG
148.RYRF11 CCNTGGATGACNMGNATHGC(PWMTRIA) RT-PCR product P10
149.RYRR11 TGYTGNGGRTGRTCDATCAT(MIDHPQQ)
237.A3.7F2 GCCAAGATCATAGACGACACG RT-PCR product P11
234.47.5R1 CCAAAGCCTGCTGGTTCTGT
132.RYRF4 ATGGAYTTYTAYTGGCAYTA (MDFYWHY) RT-PCR product P12
133.RYRR4 GGYTCRTTNGGCATRTGYTC(EHMPNEP)
153.RYRSF1 GGACTACATCGGGTTCTGCG RT-PCR product P13
155.RYRSR2 GGTCTTCTCCATGCCCAGCA
134.RYRF5 GTNAAYTAYTGGGAYAARTT (VNYWDKF) RT-PCR product P14
136.RYRR5 CATRTTCCANACRTANGTYTC(ETYVWNM)
276.H2.2R1 TGGAAGAACCTCAGCACATCGC 5′ -RACE product R5
277.H2.2R2 ACACTAAGATCAAGTCGTCTCCCAC
201.48F1 CAACAAGAACTGCCACGACA 3′ -RACE product R3
202.48F2 GAGCATAACTTGGCGAACTACA
371.CmRyRF1 GTCAGTTCCGGGAAATGGTA diagnostic PCR for exon a
372.CmRyRR1 CCCACTGCTTGCCAAACGAC
373.CmRyRF2 CAGTTTCGGGCAGCAGTTCA diagnostic PCR for exon b
374.CmRyRR2 ATCCTGGTATCTGGCATTTC
375.CmRyRF3 AACAACGACCTCAACACCAT diagnostic PCR for the absence of exon c
376.CmRyRR3 GTGGCTGAATCCGTACCACC
377.CmRyRF4 TCGACCACCAGATGTCGTGA diagnostic PCR for the presence of exon c
378.CmRyRR4 TATCGGTGAGGAGGTCGTAG
*

Corresponding amino acid sequences for degenerate primers were shown in parentheses.