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. Author manuscript; available in PMC: 2012 May 2.
Published in final edited form as: Virology. 2004 Sep 15;327(1):144–154. doi: 10.1016/j.virol.2004.06.035

Table 3.

EIAV Gag CA protein synthetic peptides used for EC identification

Pool Amino acid sequence Peptide name
P3 PIMIDGAGNRNFRPL P3-1
DGAGNRNFRPLTPRG P3-2
NRNFRPLTPRGYTTW P3-3
RPLTPRGYTTWVNTI P3-4
PRGYTTWVNTIQTNG P3-5
TTWVNTIQTNGLLNE P3-6
NTIQTNGLLNEASQN P3-7
TNGLLNEASQNLFGI P3-8
LNEASQNLFGILSVD P3-9
SQNLFGILSVDCTSE P3-10
FGILSVDCTSEEMNA P3-11
P4 SVDCTSEEMNAFLDV P4-1
TSEEMNAFLDVVPGQ P4-2
MNAFLDVVPGQAGQK P4-3
LDVVPGQAGQKQILL P4-4
PGQAGQKQILLDAID P4-5
GQKQILLDAIDKIAD P4-6
ILLDAIDKIADDWDN P4-7
AIDKIADDWDNRHPL P4-8
IADDWDNRHPLPNAP P4-9
WDNRHPLPNAPLVAP P4-10
HPLPNAPLVAPPQGP P4-11
P5 NAPLVAPPQGPIPMT P5-1
VAPPQGPIPMTARFI P5-2
QGPIPMTARFIRGLG P5-3
PMTARFIRGLGVPRE P5-4
RFIRGLGVPRERQME P5-5
GLGVPRERQMEPAFD P5-6
PRERQMEPAFDQFRQ P5-7
QMEPAFDQFRQTYRQ P5-8
AFDQFRQTYRQWIIE P5-9
FRQTYRQWIIEAMSE P5-10
P6 YRQWIIEAMSEGIKV P6-1
IIEAMSEGIKVMIGK P6-2
MSEGIKVMIGKPKAQ P6-3
GIKVMIGKPKAQNIRQ P6-4
MIGKPKAQNIRQGAKE P6-5
PKAQNIRQGAKEPYPE P6-6
NIRQGAKEPYPEFVDR P6-7
GAKEPYPEFVDRLLSQ P6-8
PYPEFVDRLLSQIKSE P6-9
FVDRLLSQIKSEGHPQ P6-10
LLSQIKSEGHPQEISK P6-11
IKSEGHPQEISKFLTD P6-12
P7 GHPQEISKFLTDTLTI P7-1
EISKFLTDTLTIQNAN P7-2
FLTDTLTIQNANEECR P7-3
TLTIQNANEECRNAMR P7-4
QNANEECRNAMRHLRP P7-5
EECRNAMRHLRPEDTL P7-6
NAMRHLRPEDTLEEKM P7-7
HLRPEDTLEEKMYACR P7-8
EDTLEEKMYACRDIGT P7-9
EEKMYACRDIGTTKQK P7-10
YACRDIGTTKQKMMLL P7-11
DIGTTKQKMMLLAKAL P7-12