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. 2012 May 3;7(5):e35738. doi: 10.1371/journal.pone.0035738

Table 1. Primers for conventional fliC PCR and primers and TaqMan probe for identification and diagnosis of ‘D. solani’.

primer or probe sequence (5′ 3′) reference derived from amplicon use
fliC-1 TATCAACAGCGCCAAAGACAACGC 37 D. dadantii CFBP 3855 ∼650 bp PCR & sequencing
fliC-2 ACGGCTCATGTTGGATACTTCGTT
fliC-for GACCGTACTGCAATCCAGC 38 D. dadantii CFBP 3855 ∼370 bp PCR & sequencing
fliC-rev CTGGAAGCGGTTCAGAGT
ds-f GCGAACTTCAACGGTAAA this study D. solani’ GBBC 2040 112 bp TaqMan® real-time PCR
ds-r CAGAGCTACCAACAGAGA
ds-p* CTCTGCTGGACGGTTC
*

probe.