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| Predicted Regulation | |||
| Activation | Inhibition | No Regulation | |
| Actual Regulation | |||
| Activation | TP | FP | FN |
| Inhibition | FP | TP | FN |
| No Regulation | FP | FP | TN |
Classifications of predicted links as true positives (TP), false positives (FP), true negatives (TN) and false negatives (FN). The assignment given here is used in the three-class classification problem to compute sensitivity, specificity and precision.
