Table 1.
Studied targets | Primer sequences 5′–3′ | T m [°C]a | Primers | PCR products [bp] | |
---|---|---|---|---|---|
Names | [μmol/L]b | ||||
S. agalactiae | TTT CAC CAG CTG TAT TAG AAG TA | 55.3 | Sag59 | 0.125 | 153 |
GTT CCC TGA ACA TTA TCT TTG AT | 55.3 | Sag190 | |||
(Ke et al. 2000) | |||||
Ia serotype | GG TCA GAC TGG ATT AAT GGT ATG C | 64.0 | Ia-F | 0.25 | 521 |
GTA GAA ATA GCC TAT ATA CGT TGA ATG C | 64.0 | Ia-R | 1,826 | ||
(Poyart et al. 2007) | |||||
III serotype | TCC GTA CTA CAA CAG ACT CAT CC | 63.0 | III-F | 0.5 | 1,826 |
AGT AAC CGT CCA TAC ATT CTA TAA GC | 63.0 | III-R | |||
(Poyart et al. 2007) | |||||
V serotype | GAG GCC AAT CAG TTG CAC GTA A | 64.0 | V-F | 0.375 | 701 |
AAC CTT CTC CTT CAC ACT AAT CCT | 62.0 | V-R | |||
(Poyart et al. 2007) | |||||
mefA/E gene | AGT ATC ATT AAT CAC TAG TGC | 46.5 | mefA | 0.25 | 348 |
TTC TTC TGG TAC TAA AAG TGG | 48.5 | mefE | |||
(Sutcliffe et al. 1996) | |||||
erm B gene | GGA AAG GTA CTC AAC CAA ATA A | 46.5 | ermB1 | 0.375 | 639 |
CAT TTG TTA AAT TCA TGG CAA TGA | 48.8 | ermB2 | |||
(Sutcliffe et al. 1996) | |||||
ST17 clone | ATA CAA ATT CTG CTG ACT ACC G | 51.1 | ST17S | 0.125 | 210 |
TTA AAT CCT TCC TGA CCA TTC C | 51.1 | ST17AS | |||
(Lamy et al. 2006) |
a T m temperature specified by the manufacturer
bConcentration of primers in the multiplex reaction mixture