Table 2.
Logistic regression | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNP | LD blk #SNPs |
GDBR | G | H1 | H2 | ||||||||
G | H1 | H2 | Score | SSU | UminP | Score | SSU | UminP | Score | SSU | UminP | ||
rs4363506 | 3 | < .001 | < .001 | < .001 | 1.64×10−5 | 3.21×01−6 | 2.44×10−5 | 7.50×10−5 | 3.82×10−6 | 3.72×10−5 | 0.0196 | 1.30×10−5 | 0.0001 |
rs7976059 | 4 | 0.018 | 0.022 | 0.007 | 0.0037 | 0.0161 | 0.0061 | 0.0051 | 0.0192 | 0.0079 | 0.0057 | 0.0060 | 0.0531 |
rs10773543 | 2 | < .001 | < .001 | < .001 | 0.0004 | 2.46×10−5 | 7.62×10−5 | 0.0002 | 1.53×10−5 | 5.14×10−5 | 0.0001 | 3.13×10−5 | 0.0001 |
Logistic regression | |||||||||||||
Single-marker | L1 | L2 | L3 | ||||||||||
SNP | 1-DF | 2-DF | Score | SSU | UminP | Fisher | Fisher | ||||||
rs4363506 | 3.64×10−6 | 1.52×10−6 | 3.90×10−5 | 8.95×10−6 | 1.57×10−5 | < 1.00×10−6 | < 1.00×10−6 | ||||||
rs7976059 | 0.0008 | 6.56×10−5 | 0.0012 | 0.0303 | 0.0190 | 0.0416 | 8.80×10−5 | ||||||
rs10773543 | 0.0003 | 3.55×10−5 | 5.98×10−5 | 2.98×10−6 | 2.23×10−5 | < 1.00×10−6 | < 1.00×10−6 |