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. 2012 Feb 1;9(2):119–129. doi: 10.4161/rna.18643

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Copyright © 2012 Landes Bioscience

This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited.

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graphic file with name rna-9-119-g3.jpg — Figure 3. Conservation of the S. meliloti Smr sRNAs in the Rhizobiales. CMs generated in this work along with the name of the query S. meliloti sRNA sequences are listed to the left. The newly predicted chromosomal copies of the Smr14 gene are indicated with an asterisk. All bacterial species with representatives of the αr RNA families are indicated on top of the panel grouped by taxonomic families i.e., Rhizobiaceae, Brucellaceae, Phyllobacteriaceae, Bartonellaceae, Xanthobacteriaceae and Beijerinckaceae, as follows; Sm, S. meliloti 1021; Smed, S. medicae WSM419; Sf, S. fredii NGR234; At, Agrobacterium tumefaciens C58; Ar, A. radiobacter K84; Av, A. vitis S4; AH13, A. sp H13–3; ReCIAT, Rhizobium etli CIAT652; ReCFN, R. etli CFN42; Rlv, R. leguminosarum bv. viceae 3841; Rlt1325, R. leguminosarum bv. trifolii WSM1325; Rlt2304, R. leguminosarum bv. trifolii WSM2304; Ba19941, Brucella abortus bv. One 9–941; BaS19, B. abortus S19; Bs23445, B. suis ATCC23445; Bs1330, B. suis 1330; Bmi, B. microti CCM4915; Bo, B. ovis ATCC25840; Bc, B. canis ATCC 23365; Bma, B. melitensis bv. abortus 2308; Bm16M, B. melitensis bv. 1 16M; Bm23457, B. melitensis ATCC23457; Oa, Ochrobactrum anthropi ATCC49188; Ml, Mesorhizobium loti MAFF303099; Mc, M. ciceri bv. biserrulae WSM1271; MBNC, M. sp BNC1; Bah, Bartonella henselae Houston-1; Bac, B. clarridgeiae 73; Bat, B. tribocorum CIP105476; Baq, B. quintana Toulouse; Bab, B. bacilliformis KC583; Bag, B. grahamii as4aup; Ac, Azorhizobium caulinodans ORS571; Sn, Starkeya novella DSM506; Xa, Xanthobacter autotrophicus Py2; Ms, Methylocella silvestris BL2, Bi, Beijerinckia indica subsp indica ATCC9039. Grey bars indicate distribution of each sRNA family in these bacterial species. If more than one, the number of chromosomal and extrachromosomal copies of each sRNA gene is also indicated.