Table 1. Query S. meliloti sRNA sequences.
Name | Alternative namesa | 5′-endb,c | 3′-endb | Length (nt) |
---|---|---|---|---|
Smr7C |
Sra03/Sm13/SmelC023 |
201,679 |
201,828 |
150 |
Smr9C |
Sra32/Sm10/SmelC289 |
1398,425 |
1398,277 |
149 |
Smr14C |
Sm7/SmelC397 |
1,667,613 |
1,667,491 |
123 |
Smr15C |
Sra41/Sm3/SmelC411 |
1,698,731 |
1,698,617 |
115 |
Smr16C |
Sra41/Sm3′/SmelC412 |
1,698,937 |
1,698,817 |
121 |
Smr35B |
SmB6/SmelC053 |
577,730 |
577,868 |
139 |
Smr45C |
SmelC706 |
3,105,445 |
3,105,298d |
148 |
Smr22C | Sra56/Sm1/SmelC667/6S | 2,972,251 | 2,972,091c | 161 |
b Coordinates according to the S. meliloti 1021 genome database at http://iant.toulouse.inra.fr/bacteria/annotation/cgi/rhime.cgi or www.rhizogate.de;
c RACE-based mapping_ENREF_32;6
d Deep-sequencing data9