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. 2012 May;78(9):3128–3135. doi: 10.1128/AEM.07605-11

Table 4.

Synthesis of nucleosides by T. thermophilus NPsa

Enzyme Acceptor Feature % Synthesis (mean ± SD)b
TtPNPI HX 2,6-Dioxo 42.0 ± 0.5
BI Backbone only ND
DAP 2,6-Diamino ND
TtPNPII A 6-Amino 51.0 ± 0.4
BI Backbone only ND
DAP 2,6-Diamino 41.7 ± 1.5
TtPyNP U 2,4-Dioxo 49.1 ± 1.3
5-FC 2-Oxo,4-amino,5-fluoro ND
DFU 2,4-Difluoro ND
6-tFMeU 2,4-Dioxo,6-trifluoromethyl ND
FMPy 5-Fluoro,2-methoxy ND
5-IU 2,4-Dioxo,5-iodo 47.8 ± 1.1
a

The transferred sugar moiety was a 2′-deoxyribose obtained by phosphorolysis of dUrd or Thd by TtPyNP. The reaction conditions for nucleoside synthesis by TtPNPI and TtPNPII were as follows: 5 mM dUrd and 2.5 mM acceptor nucleobase in sodium phosphate buffer (50 mM, pH 7.0), 10 μg of TtPyNP ml−1, 5 μg of TtPNPI or TtPNPII ml−1, and 30 min at 65°C. The reaction conditions for nucleoside synthesis by TtPyNP were as follows: 5 mM Thd and 2.5 mM acceptor in sodium phosphate buffer (50 mM, pH 7.0), 5 μg of TtPyNP ml−1, and 30 min at 65°C. Acronyms: HX, hypoxanthine; BI, benzimidazole; DAP, 2,6-diaminopurine; A, adenine; U, uracil; 5-FU, 5-fluorouracil; DFU, 2-deoxy-2-fluorouracil; 6-tMeFU, 6-trifluoromethyluracil; FMPy, 5-fluoro-2-methoxy-4(1H)pyrimidinone; 5-IU, 5-iodouracil.

b

Percentage of free nucleobase converted into nucleoside with respect to the total amount of nucleobase used as a substrate. ND, not detected.