Table 3.

Allele values of patient N’s Y-chromosomal SNPs characterizing his affiliation with the haplogroup R1a1a.

Haplogroup	SNP	GA allele	SOLiD allele	Ancestral allele
R	rs2032658	N/A	G	A
R	rs17307398	T	T	C
R	rs4481791	C	N/A	G
R	rs9786261	N/A	A	G
R	rs891407	G	G	C
R1	rs17307070	N/A	T	G
R1	rs9786232	G	G	T
R1	rs9785959	G	N/A	C
R1	rs9786197	N/A	C	T
R1	rs7067478	A	N/A	G
R1a	rs17222573	N/A	G	A
R1a	rs17307677	N/A	C	T
R1a	rs17306692	A	N/A	C
R1a1	rs17222202	N/A	A	T
R1a1	rs17316227	N/A	G	A
R1a1	rs2534636	N/A	T	T*
R1a1a	rs17222146	N/A	T	С
R1a1a	rs17315926	T	T	C
R1a1a	rs17221601	N/A	A	T

Note: The markers found using both sequencing platforms are drawn in bold. *rs2534636 is the back mutation for the haplogroup R1a1.