Table 2.
Details of Culexflavivirus (CxFV) strains used in this study
| No. | Strain | Year | Geographic Location | GenBank accession no. | ||
|---|---|---|---|---|---|---|
| Country | Location | Source/Host | ||||
| 1 | SDDM06-11* | 2006 | China | Dongming | Culexpipiens | JF938690 |
| 2 | Tokyo | 2003 | Japan | Tokyo-Shinjuku | Culexpipiens | NC_008604/AB262759 |
| 3 | NIID-21-2 | 2004 | Japan | Tokyo-Shinjuku | Culexpipiens | AB377213 |
| 4 | Narita | 2003 | Japan | Chiba-Narita | Culexpipiens | AB262760 |
| 5 | Toyama | 2003 | Japan | Toyama | Culexpipiens | AB262761 |
| 6 | Hokkaido | 2003 | Japan | Hokkaido-Abashiri | Culexpipiens | AB262762 |
| 7 | Osaka | 2003 | Japan | Osaka | Culexpipiens | AB262763 |
| 8 | Mie-Cp | 2004 | Japan | Mie-Tsu | Culexpipiens | AB262764 |
| 9 | Morioka | 2003 | Japan | Iwate-Morioka | Culexpipiens | AB262765 |
| 10 | Mie-Ct | 2004 | Japan | Mie-Tsu | Culextritaeniorhynchus | AB262767 |
| 11 | Surabaya | 2004 | Indonesia | Surabaya | Culexquinquefasciatus | AB262766 |
| 12 | Izabal | 2006 | Guatemala | Puerto Rico Izabal | Culexquinquefasciatus | EU805805 |
| 13 | HOU24518 | 2008 | USA | Texas-Harris county | Culexquinquefasciatus | FJ502995 |
| 14 | HOU24519 | 2008 | USA | Texas-Harris county | Culexrestuans | FJ502996 |
| 15 | HOU24284 | 2008 | USA | Texas-Harris county | Culexrestuans | FJ502997 |
| 16 | HOU24471 | 2008 | USA | Texas-Harris county | Culexrestuans | FJ502998 |
| 17 | HOU24516 | 2008 | USA | Texas-Harris county | Culexquinquefasciatus | FJ502999 |
| 18 | HOU24559 | 2008 | USA | Texas-Harris county | Culexquinquefasciatus | FJ503001 |
| 19 | TR3115 | 2008 | West Indies, Trinidad | Champs Fleur | Culexquinquefasciatus | FJ503002 |
| 20 | HOU24522 | 2008 | USA | Texas-Harris county | Culexquinquefasciatus | FJ503000 |
| 21 | TR3116 | 2008 | West Indies, Trinidad | Champs Fleur | Culexquinquefasciatus | FJ503003 |
| 22 | CxFV-Mex07 | 2007 | Mexico | Yucatan State | Culexquinquefasciatus | EU879060 |
| 23 | 1064 | 2007 | USA | Iowa | Culexpipiens | FJ663026 |
| 24 | 380 | 2007 | USA | Iowa | Culexpipiens | FJ663027 |
| 25 | 383 | 2007 | USA | Iowa | Culexpipiens | FJ663028 |
| 26 | 635 | 2007 | USA | Iowa | Culexpipiens | FJ663029 |
| 27 | 318 | 2007 | USA | Iowa | Culexpipiens | FJ663030 |
| 28 | 377 | 2007 | USA | Iowa | Culexpipiens | FJ663031 |
| 29 | 599 | 2007 | USA | Iowa | Culexpipiens | FJ663032 |
| 30 | 657 | 2007 | USA | Iowa | Culexpipiens | FJ663033 |
| 31 | Iowa07 | 2007 | USA | Iowa | Culexpipiens | FJ663034 |
| 32 | Uganda08 | 2008 | Uganda | Entebbe | Culexquinquefasciatus | GQ165808 |
| 33 | T955 | 2008 | Mexico | Yucatan Peninsula | Culexinterrogator | GU289683 |
| 34 | M2168 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289684 |
| 35 | M2313 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289685 |
| 36 | M2605 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289686 |
| 37 | M2614 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289687 |
| 38 | M2617 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289688 |
| 39 | M2618 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289689 |
| 40 | M2630 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289690 |
| 41 | M2635 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289691 |
| 42 | M2636 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289692 |
| 43 | M2637 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289693 |
| 44 | M2644 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289694 |
| 45 | M2645 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289695 |
| 46 | M2648 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289696 |
| 47 | M2650 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289697 |
| 48 | M2656 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289698 |
| 49 | M2663 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289699 |
| 50 | M2665 | 2008 | Mexico | Yucatan Peninsula | Culexquinquefasciatus | GU289700 |
*Sequence of SDDM06-11 was used in the present study.