Table 2.

Common and Unique Exons with Consistently Low Coverage across All RDT and SS Samples

RDT			SS			RDT and SS
Gene	Exon #	%GC	Gene	Exon #	%GC	Gene	Exon #	%GC
COL6A1	5	65	LAMA2	53	33	COL6A1	1	73
COL6A1	12	67	SEPN1	3	58	LAMA2	1	71
COL6A1	24	68				LAMA2	44	17
COL6A1	30	59				SEPN1	1	87
COL6A1	34	50				POMT1	2	60
COL6A1	35	67				POMT1	3	45
COL6A2	3	65				POMT1	4	39
COL6A2	6	65				POMT1	5	59
COL6A2	7	64				POMT1	6	40
COL6A2	14	68				POMT1	7	56
COL6A2	16	71				POMT1	8	57
COL6A2	22	73				POMT1	9	55
COL6A2	24	63				POMT1	10	59
COL6A2	26	62				POMT1	11	51
COL6A2	27	59				POMT1	12	67
COL6A3	13	48				POMT1	13	57
COL6A3	15	63				POMT1	14	49
FKTN	6	41				POMT1	15	67
FKTN	7	45				POMT1	16	64
ITGA7	15	62				POMT1	17	59
ITGA7	25	66				POMT1	18	57
LAMA2	27	36				POMT1	19	61
LAMA2	47	43				POMT1	20	55
POMT2	9	62
POMT2	10	40
SEPN1	6	87

Coverage was <20× average.

%GC, percent GC content.