Table 4.
Time taken by nBMST for different sizes of DNA sequence data
| Species strain | RefSeq No. | Data size (MB3) | Seq length (Mbp4) | Total Time1 | Total motifs1 | Total Time2 | Total motifs2 |
|---|---|---|---|---|---|---|---|
| Neisseria gonorrhea FA 1090 | NC_002946.2 | 2.1 | 2.2 | 1 min | 650 | 0 hr 53 min | 3196 |
| Mycobacterium tuberculosis H37Rv | NC_000962.2 | 4.3 | 4.4 | 1 min | 1493 | 1 hr 50 min | 3787 |
| Bacillus anthracis Ames | NC_003997.3 | 5.1 | 5.2 | 2 min | 1319 | 2 hrs 9 min | 6704 |
| Pseudomonas fluorescens SBW25 | NC_012660.1 | 6.6 | 6.7 | 2 min | 1327 | 2 hrs 45 min | 5433 |
| Caenorhabditis elegans chromosome I | NC_003279.6 | 14.5 | 15.1 | 4 min | 5528 | 6 hrs 10 min | 57883 |
1
APR, DR, G-QUADRUPLEX, AND Z-DNA MOTIFS
2
APR, DR, G-QUADRUPLEX, Z-DNA MOTIFS, IR, AND MR MOTIFS
3
MB, MEGABYTE
4
MBP, MEGA BASE PAIR