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. 2012 May 14;7(5):e37159. doi: 10.1371/journal.pone.0037159

Table 6. List of down-regulated genes in CD90+CSCs as compared with CD90+NTSCs.

GeneId GeneSymbol Gene Name log2 ratio P value FDR Function
NM_006988 ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 −3.275 0.000 0.000 Kidney development
NM_170697 ALDH1A2 Aldehyde dehydrogenase 1 family, member A2 −6.559 0.000 0.000 Liver development
NM_001039667 ANGPTL4 Angiopoietin-like 4 −1.900 0.000 0.000 Hypoxia
NM_005173 ATP2A3 ATPase, Ca++ transporting, ubiquitous −3.683 0.019 0.025 Nucleotide binding
NM_133468 BMPER BMP binding endothelial regulator −4.778 0.003 0.005 Inhibitor of bone morphogenetic protein (BMP) function
NM_002982 CCL2 Chemokine (C-C motif) ligand 2 −6.608 0.000 0.000 Moncyte chemotaxis
NM_033027 CSRNP1 Cysteine-serine-rich nuclear protein 1 −2.647 0.001 0.002 Transcription factor regulation
NM_001554 CYR61 Cysteine-rich, angiogenic inducer, 61 −2.900 0.000 0.000 Cell adhesion
NM_001511 CXCL1 Chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) −3.078 0.037 0.041 Chemotaxis
NM_001955 EDN1 Endothelin 1 −3.670 0.000 0.000 Response to hypoxia
NM_001130055 EEF1D Eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) −1.236 0.000 0.000 Translation elognation activity
NM_005438 FOSL1 FOS-like antigen 1 −3.834 0.001 0.002 Transcription factor regulation
NM_000518 HBB Hemoglobin, beta −2.335 0.000 0.000 Oxygen transporter activity
NM_181054 HIF1A Hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) −1.788 0.048 0.049 Response to hypoxia
NM_033439 IL33 Interleukin 33 −2.085 0.011 0.016 Cytokine acitivity
NM_000600 IL6 Interleukin 6 (interferon, beta 2) −7.169 0.000 0.000 Cytokine acitivity
NM_000584 IL8 Interleukin 8 −3.981 0.037 0.041 Chemotaxis
NM_002391 MDK Midkine (neurite growth-promoting factor 2) −1.832 0.002 0.004 Nucleotide binding Function
NM_006325 RAN RAN, member RAS oncogene family −2.153 0.000 0.000 RNA binding Function
NM_001004 RPLP2 Ribosomal protein, large, P2 −1.714 0.000 0.000 RNA binding Function
NM_004704 RRP9 Ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) −1.711 0.048 0.049 Processing of pre-ribosomal RNA
NM_003955 SOCS3 Suppressor of cytokine signaling 3 −1.591 0.000 0.000 Response to hypoxia
NM_003254 TIMP1 TIMP metallopeptidase inhibitor 1 −4.580 0.000 0.000 Extracellular matrix de
NM_016639 TNFRSF12A Tumor necrosis factor receptor superfamily, member 12A −3.592 0.001 0.002 Apoptosis
NM_080682 VCAM1 Vascular cell adhesion molecule 1 −3.633 0.000 0.000 Cell adhesion
NM_001025370 VEGFA Vascular endothelial growth factor A −3.399 0.037 0.040 Response to hypoxia