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. 2012 Feb 27;8:14. doi: 10.1186/1744-8069-8-14

Table 1.

Primers sequence for RT-qPCR and results of RT-qPCR analysis.

mRNA Primers sequence CFA SNI
Ispi
vs Sham
Contra
vs Sham
Ispi
vs Sham
Contra
vs Sham
MeCP2 e1 F 5'-ggagagactggaggaaaagtca-3' 137% ** 158% * 74% * ns
R 5'-ccttcttaaacttcaggggtttc-3'
MeCP2 e2 F 5'-ctgtttgggagaagcagagg-3' ns 134% * 85% * ns
R 5'-tggtagctgggatgttaggg-3'
FKBP5 F 5'-caccctgagcctggagagag-3' ns ns ns ns
R 5'-gtgtcgccattactcgcagag-3'
SGK1 F 5'-gggctgtcttgtatgagatgc-3' ns ns ns ns
R 5'-gtgccttgctgagttggtg-3'
SULT1a1 F 5'-ccgaggagactgtggattc-3' ns ns ns ns
R 5'-gcatagtgggcatcaaagc-3'
DNMT1 F 5'-ggagtgtgtgaaagagaaa-3' 112% * 114% ** 87% * ns
R 5'-tagccttcctcagacaat-3'
DNMT3a F 5'-aattgtgtcttggtggat-3' 125% * 124% * ns ns
R 5'-actgagaatttgccatct-3'
DNMT3b F 5'-ggagacagcagacatctt-3' ns 131% * ns ns
R 5'-gtcactacagttcccattaac-3'
HDAC1 F 5'-cctcaccgaatccgaatg-3' 120% * 128% ** ns ns
R 5'-cgaatagaacgcaagaacttg-3'
HDAC2 F 5'-tcaagtttctacgatcaataagg-3' ns ns ns 90% *
R 5'-cttctccgacattaaatctctg-3'
HDAC5 F 5'-aagtacgttcaaggctaa-3' 117% ** 114% ** 77% *** ns
R 5'-cgactgctctcttcttaa-3'
β-Actin F 5'-agattactgccctggctccta-3' ns ns ns ns
R 5'-aggatagagccaccaatccac-3'
HGPRT F 5'-aggacctctcgaagtgttggatac-3' ns ns ns ns
R 5'-tgtagattcaacttgccgctgtc-3'

* P < 0.05; ** P < 0.01; ns: non significant. CFA N = 5 in each group and SNI N = 7 in each group