Table 1. Description of A. phagocytophilum strains and PCR results with corresponding GenBank accession numbers for individual genes analysed in this study.
| Strain ID | Host species | Origin | PCR results (accession no. shown if successful*) | ||
| 23S–5S rRNA | groESL | ank | |||
| Scg_752_HV | Sceloporus graciosus | Hoopa Valley | JF487929 | na | na |
| Sco_622_HV | Sceloporus occidentalis | Hoopa Valley | JF487929 | na | na |
| Sco_760_HV | Sceloporus occidentalis | Hoopa Valley | JF487930 | na | na |
| Ec_765_HV | Elgaria coeruleus | Hoopa Valley | JF487930 | na | na |
| Sg_730_HV | Sciurus griseus | Hoopa Valley | JF451142 | JF494840 | JF303732 |
| Sg_167_BB | Sciurus griseus | Big Basin | JF451139 | JF494840 | JF303732 |
| Sg_168_BB | Sciurus griseus | Big Basin | JF451139 | na | JF303733 |
| Sc_1225_BB | Sciurus carolinensis | Big Basin | na | na | JF303732 |
| To_1591_HW | Tamias ochrogenys | Hendy Woods | JF451141 | na | na |
| To_1634_HW | Tamias ochrogenys | Hendy Woods | JF451141 | na | na |
| To_1755_HW | Tamias ochrogenys | Hendy Woods | JF451139 | na | na |
| Ts_219_SPT | Tamias sonomae | Samuel P. Taylor | JF451139 | JF494840 | JF303733 |
| Ts_279_SPT | Tamias sonomae | Samuel P. Taylor | JF451139 | na | JF303733 |
| Nf_1026_HW | Neotoma fuscipes | Hendy Woods | JF451141 | JF494841 | JF303734 |
| Nf_1217_HV | Neotoma fuscipes | Hoopa Valley | JF451141 | JF494838 | JF303737 |
| Nf_1218_HV | Neotoma fuscipes | Hoopa Valley | JF451141 | JF494838 | JF303737 |
| Nf_1220_HV | Neotoma fuscipes | Hoopa Valley | JF451141 | JF494837 | JF303738 |
| Nf_1222_HV | Neotoma fuscipes | Hoopa Valley | JF451141 | JF494837 | JF303738 |
| Nf_1443_HW | Neotoma fuscipes | Hendy Woods | JF451141 | na | JF303735 |
| Nf_1496_HW | Neotoma fuscipes | Hendy Woods | JF451141 | na | JF303739 |
| Nf_1503_HW | Neotoma fuscipes | Hendy Woods | JF451141 | na | JF303736 |
| Nf_1603_HV | Neotoma fuscipes | Hoopa Valley | JF451141 | JF494836 | JF776828 |
| Nf_1605_HV | Neotoma fuscipes | Hoopa Valley | JF451141 | JF494837 | JF303738 |
| Nf_1606_HV | Neotoma fuscipes | Hoopa Valley | JF451141 | JF494837 | JF303737 |
| Nf_1607_HV | Neotoma fuscipes | Hoopa Valley | JF451141 | na | na |
| Nf_1619_HC | Neotoma fuscipes | Henry Cowell | JF451141 | JF494834 | JF303740 |
| Nf_1629_HC | Neotoma fuscipes | Henry Cowell | JF451141 | JF494835 | JF303741 |
| Nf_1692_HC | Neotoma fuscipes | Henry Cowell | JF451141 | na | na |
| Nf_1707_HC | Neotoma fuscipes | Henry Cowell | JF451141 | na | na |
| Nf_1712_HC | Neotoma fuscipes | Henry Cowell | JF451141 | na | na |
| Nf_DU1_HW | Neotoma fuscipes | Hendy Woods | JF451141 | JF494841 | JF303739 |
| Nf_13.2_HW | Neotoma fuscipes | Hendy Woods | JF451141 | JF494841 | JF303739 |
| Dog_CA | Canis lupus familiaris | Tuolumne County | JF451139 | JF494833 | JF303732 |
| MRK_CA | Equus caballus | Shasta County | JF451139 | JF494840 | JF303732 |
| HZ_NY | Homo sapiens | New York State | JF451140 | JF494839 | JF303731 |
*
Identical sequences are represented by a single accession number.