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. Author manuscript; available in PMC: 2013 May 1.
Published in final edited form as: Curr Protoc Microbiol. 2012 May;CHAPTER:Unit2B.2. doi: 10.1002/9780471729259.mc02b02s25

Table 3.

Troubleshooting guide for microscope parameters

Problem Possible Cause Possible Remedy
Specimen moves while imaging Poor contact with mounting substrate Press specimen more firmly on surface of mount
Poor contact of specimen to mount Apply conductive paint around specimen to improve contact
Excessive charging of sample Inadequate bulk conductivity Decrease number of electrons entering sample or Increase number of electrons exiting sample (See Supplemental Table 1)
Specimen oxidized
Image appears stretched Astigmatism from contaminants Stigmate aperture
Unable to stigmate Misaligned objective aperture Center beam and aperture