Table 4.
Subgroups† | N | No. polymorphic loci | HE‡ | SD | Multilocus LD (rd-values) |
---|---|---|---|---|---|
Mesoamerican wild | |||||
MW_1 | 27 | 223 | 0.22 | 0.11 | 0.01** |
MW_2 | 8 | 113 | 0.16 | 0.09 | 0.04** |
MW_3 | 3 | 0 | – | – | – |
Mesoamerican domesticated | |||||
MD_1 | 20 | 135 | 0.12 | 0.06 | 0.02** |
MD_2 | 14 | 120 | 0.13 | 0.06 | 0.02** |
MD_3 | 5 | 37 | 0.05 | 0.03 | 0.35** |
Andean wild | |||||
AW_1 | 5 | 101 | 0.16 | 0.10 | 0.02** |
AW_2 | 17 | 69 | 0.07 | 0.04 | 0.03** |
AW_3 | 9 | 63 | 0.07 | 0.04 | 0.02** |
Andean domesticated | |||||
AD_1 | 19 | 102 | 0.08 | 0.04 | 0.02** |
AD_2 | – | – | – | – | – |
AD_3 | 10 | 82 | 0.10 | 0.05 | 0.03* |
N, number of genotypes; SD, standard deviation.
Multilocus LD significance: *P = 0.01, **P < 0.01.
Mesoamerican wild (subclusters MW_1, MW_2, MW_3), Mesoamerican domesticated (subclusters MD_1, MD_2, MD_3), Andean wild (subclusters AW_1, AW_2, AW_3), Andean domesticated (subclusters AD_1, AD_2, AD_3).
Unbiased Genetic Diversity (Nei 1978).