Table 3.
Structure | NAD C4N - Lig “C”a | Zn - Lig O | Ser48 OG - Lig O |
---|---|---|---|
PFB b, A subunit | 3.36 ± 0.02 | 1.97 ± 0.01 | 2.48 ± 0.01 |
B subunit | 3.36 ± 0.03 | 1.98 ± 0.01 | 2.52 ± 0.03 |
TFE b, A subunit | 3.43 ± 0.03 | 1.97 ± 0.01 | 2.48 ± 0.01 |
B subunit | 3.42 ± 0.06 | 1.98 ± 0.01 | 2.47 ± 0.10 |
FAlc c, ave of 4 | 3.40 ± 0.03* | 1.96 ± 0.02* | 2.52 ± 0.02* |
1P1R, ave of 4d | 3.48 ± 0.09 | 2.15 ± 0.04* | 2.72 ± 0.03* |
3BTO, ave of 4e | 3.56 ± 0.03* | 2.10 ± 0.04* | 2.67 ± 0.04* |
The ligands (Lig) and the atoms corresponding to the reactive carbon (“C”) are pentafluorobenzyl alcohol (C7), trifluoroethanol (C1, labeled as C2 for “ETF” in the PDB file), N-1-methylhexylformamide (C1), 3-butylthiolane 1-oxide (S6).
The distances and errors calculated with SHELXL.
The distances for the four values for the fluoroalcohols from the REFMAC refinements were averaged and compared to the averages of the four distances for the complexes with methylhexylformamide and 3-butylthiolane 1-oxide, and the * indicates that the differences relative to the complexes with fluoroalcohols were significant at p <0.01.
X-ray data for NADH and (R)-N-1-methylhexylformamide [CH3(CH2)4CH(CH3)NHCHO], Ki = 15 μM, complexed with ADH at 1.57 Å resolution; average of 4 subunits.66
X-ray data for NADH and (1S,3S)-3-butylthiolane 1-oxide, Ki = 0.72 μM, complexed with ADH at 1.66 Å resolution; average of 4 subunits.37