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. Author manuscript; available in PMC: 2012 May 16.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2009 May;18(5):1659–1662. doi: 10.1158/1055-9965.EPI-08-1148

Table 2.

Association between 16 reported prostate cancer susceptibility SNPs with prostate cancer–specific survival

Marker SNP Chromosome Position* Alleles
Frequency of risk allele HR (95% CI) P
Reference Risk allele
rs721048 2p15 63043382 G A 0.20 1.10 (0.93–1.30) 0.25
rs2660753 3p12 87193364 C T 0.10 1.15 (0.92–1.44) 0.21
rs9364554 6q25 16075365 C T 0.33 0.97 (0.84–1.12) 0.63
rs10486567 7p15 27943088 T C 0.78 0.96 (0.82–1.13) 0.64
rs6465657 7q21 97654263 T C 0.51 0.87 (0.75–1.00) 0.05
rs16901979 8q24 (2) 128194098 C A 0.06 0.89 (0.67–1.18) 0.41
rs6983267 8q24 (3) 128482487 T G 0.56 1.04 (0.91–1.19) 0.58
rs1447295 8q24 (1) 128554220 C A 0.17 0.95 (0.79–1.15) 0.62
rs1571801 9q33 121506927 G T 0.31 0.88 (0.75–1.03) 0.11
rs10993994 10q11 51219502 C T 0.43 0.94 (0.82–1.08) 0.39
rs4962416 10q26 126686862 A G 0.24 0.96 (0.82–1.13) 0.65
rs10896449 11q13 68751243 A G 0.49 0.99 (0.86–1.13) 0.83
rs4430796 17q12 33172153 C T 0.61 0.91 (0.79–1.05) 0.20
rs1859962 17q24 66620348 T G 0.54 1.03 (0.89–1.18) 0.69
rs2735839 19q13 56056435 A G 0.88 0.94 (0.77–1.15) 0.54
rs5945619 Xp11 51258412 A G 0.42 0.88 (0.72–1.07) 0.20

NOTE: Association between genotypes and prostate cancer – specific survival was assessed in a Cox regression model assuming an additive genetic effect. In each regression model, covariates representing age, clinical stage, biopsy Gleason sum, diagnostic serum PSA level, and nodal and distal metastases were included.

Abbreviations: HR, hazard ratio; CI, confidence interval; PSA, prostate-specific antigen.

*

Based on build 35.

Risk alleles are based on previously published studies.

P value from a score test in Cox regression analysis.