Table 3. Variation sites in DNA sequences for mitochondrial COI of Bactrocera species from various localities.
| Haplotype | Variation sites in DNA sequence | |||||||||||||||||
| 9 | 84 | 96 | 99 | 102 | 108 | 117 | 120 | 129 | 136 | 153 | 168 | 180 | 216 | 288 | 321 | 325 | 366 | |
| C1 | T | T | T | C | T | T | A | C | T | C | A | A | T | C | T | A | T | C |
| C2 | C | A | C | T | C | A | G | A | C | T | T | G | C | A | C | G | C | T |
| 372 | 399 | 417 | 438 | 450 | 481 | 483 | 489 | 499 | 546 | 549 | 588 | 594 | 600 | 606 | 615 | 619 | 621 | |
| C1 | C | A | T | T | C | T | A | C | T | T | C | C | T | A | C | T | C | A |
| C2 | T | G | C | C | T | C | T | T | C | C | T | T | G | C | T | A | T | G |
Haplotype CI consisted of B. caudata samples Bcau1, Bcau2, Bcau3, Bcau4, Bcau5, Bcau7, Bcau8, Bcau9, Bcau10, Bacau11, Bcau14, Bcau16, Bcau18, Bcau19, Bcau20 and Bcau21 from Peninsular Malaysia, FJ903493, B. caudata, Malaysia, GQ458048, B. caudata, China, AF423109, B. caudata, Thailand; while C2 consisted of B. caudata samples Bcau12, Bcau13, Bcau15 from Indonesia.