Table 2.
|
H1 |
H2 |
H3 |
L1 |
L2 |
L3 |
F |
||||||||||||||||||
C |
K |
K |
K |
K |
C |
K |
K |
|
|||||||||||||||||
Variant |
koff (x 10−5s−1) |
kon (x 105M−1s−1) |
KD [pM] |
Sub. |
30 |
31 |
32 |
58 |
96 |
99 |
100c |
24 |
25 |
27 |
28 |
29 |
49 |
53 |
54 |
55 |
56 |
92 |
93 |
94 |
104 |
D2E7 |
13(3) |
7.2(9) |
186(64) |
- |
D |
D |
V |
I |
S |
S |
S |
R |
A |
Q |
G |
I |
Y |
T |
L |
Q |
S |
N |
R |
A |
V |
cb1–3 |
1.1(4) |
13.43(3) |
8(3) |
10 |
|
Q |
|
|
|
|
|
H |
|
R |
K |
|
|
S |
|
L |
R |
D |
K |
P |
|
2.1b_9.0_1 |
0.8(3) |
6.9(3) |
10(4) |
6 |
|
Q |
F |
|
|
|
|
|
|
|
|
|
|
W |
|
|
|
I |
Q |
P |
|
3.1d_6.1_2 |
0.1* |
7.9(5) |
1.3* |
10 |
|
Q |
F |
|
|
|
|
|
|
|
R |
L |
|
S |
T |
I |
|
I |
Q |
P |
|
3.1f_12.1_1 |
0.4(1) |
18(2) |
2.2(8) |
13 |
|
Q |
F |
|
K |
|
|
T |
|
|
R |
L |
|
S |
T |
|
R |
I |
Q |
P |
I |
4.2a_6 |
0.052(2) |
11(2) |
0.5(7) |
12 |
G |
Q |
F |
|
|
|
|
|
|
|
R |
L |
G |
S |
T |
I |
|
I |
Q |
P |
|
4.2a_54 |
0.011(4) |
12.83(2) |
0.8(3) |
15 |
G |
Q |
F |
|
K |
|
|
T |
|
|
R |
L |
W |
S |
T |
|
R |
I |
Q |
P |
I |
4.2a_52 |
0.06(5) |
13.64(4) |
0.4(4) |
15 |
G |
Q |
F |
|
K |
|
|
T |
|
|
R |
L |
G |
S |
T |
|
R |
I |
Q |
P |
I |
2.4a_13.3_1 |
0.30(4) |
25.79(3) |
1.2(2) |
10 |
G |
|
|
V |
K |
|
Q |
|
|
|
R |
V |
|
W |
|
K |
|
D |
|
P |
|
2.8a_10.1_1 | 0.28(3) | 14.53(2) | 1.9(2) | 10 | H | F | V | T | M | S | K | K | D | P |
Amino acid substitutions, on- and off-rates and KD of the highest affinity variants from each recombination library. Compared are the D2E7 Fab and cb1–3, the best variant previously generated by yeast display FACS screening.1 C – Contact CDR definition; K – Kabat CDR definition; H1 – CDR H1; F – Framework; Sub – number of amino acid substitutions compared with D2E7. Number in parentheses represents the standard error in the last significant digit. *The intrinsic dissociation rate may be slower than the value shown since slower rates were not resolvable in the assay set-up used to measure this variant.