Table 1.
Test | Pros | Cons |
---|---|---|
Southern blot | specific | sensitivity, requires large amounts of DNA, time intensive |
ISH | specific, performed on FFPE specimens | poor sensitivity |
PCR | specific, rapid | false positives |
RT-PCR | sensitive and specific, rapid | requires intact RNA |
NGS | sensitive and specific, detect multiple HPV types | cost |
p16 | perform in clinical labs, correlates with response | not specific for HPV |
serology | easy to perform | No direct relationship to viral-associated cancer |