Table 2.
List of P-type ATPases analyzed in this study.
| Class | Gene | aa | Accession # | Locus/ORF |
|---|---|---|---|---|
| OSTREOCOCCUS TAURI | ||||
| P1B | OtHMA1 | 1052 | Q01EZ3 | Ot02g01930 |
| P1B | OtHMA2 | 681 | Q00V551 | Ot15g01530 |
| P1B | OtHMA3 | 1359 | Q014R9 | Ot07g03370 |
| P1B | OtHMA4 | 861 | Q00YQ6 | Ot11g02480 |
| P1B | OtHMA5 | 925 | Q018N8 | Ot05g03820 |
| P2A | OtECA1 | 561 | Q01FX01 | Ot01g04600 |
| P2A | OtECA2 | 1013 | Q01C29 | Ot03g04740 |
| P2B | OtACA1 | 1062 | Q011R1 | Ot09g02100 |
| P2B | OtACA2 | 780 | Q00U351 | Ot16g02150 |
| P2C | OtNAK1 | 1172 | Q01GZ3 | Ot01g00900 |
| P3A | OtAHA1 | 1043 | Q00RY32 | Ot20g00330 |
| P3A | OtAHA2 | 879 | Q017J63 | Ot06g01560 |
| P4 | OtALA1 | 1258 | Q016N2 | Ot06g03680 |
| P5A | OtP5A1 | 1398 | Q00 × 11 | Ot13g01720 |
| CHLAMYDOMONAS REINHARDTII | ||||
| P1B | CrHMA1 | 1189 | A8J6D5 | CHLREDRAFT_195998 |
| P1B | CrHMA2/CTP2 | 1086 | A8IC93 | CHLREDRAFT_205938 |
| P1B | CrHMA3/CTP3 | 504 | A8ICL14 | CHLREDRAFT_165985 |
| P1B | CrHMA4/CTP1 | 1097 | A8JBB5 | CHLREDRAFT_206047 |
| P1B | CrHMA5 | 1041 | A8J829 | CHLREDRAFT_195962 |
| P2A | CrECA1 | 1069 | A8I542 | CHLREDRAFT_77047 |
| P2A | CrECA2 | 845 | g7623505,6 | Cre22.g762350 |
| P2B | CrACA1 | 1179 | A8IZL7 | CHLREDRAFT_196702 |
| P2B | CrACA2 | 1009 | A8IJV9 | CHLREDRAFT_128099 |
| P2B | CrACA3/FAB39 | 930 | A8J0V21 | CHLREDRAFT_118223 |
| P2B | CrACA4 | 1191 | A8IS11 | CHLREDRAFT_189266 |
| P2B | CrACA5 | 873 | A8JEM47 | CHLREDRAFT_179136 |
| P2B | CrACA6 | 1434 | A8HM60/g0363508 | CHLREDRAFT_116583/Cre01.g036350 |
| P2C | CrNAK1 | 1112 | A8HX15 | CHLREDRAFT_187139 |
| P2D | CrENA1 | 1004 | A8J4M6 | CHLREDRAFT_104709 |
| P2D | CrENA2 | 1001 | A8J4M4 | CHLREDRAFT_130931 |
| P3A | CrAHA1/CrPMH1 | 1081 | A8IFK0/Q9FNS3 | CHLREDRAFT_54949 |
| P3A | CrAHA2 | 802 | A8IFH01 | CHLREDRAFT_38137 |
| P3A | CrAHA3/CrPMA2 | 1081 | Q93Z22 | CHLREDRAFT_182602 |
| P3A | – | 1628 | g3169509 | Cre07.g316950 |
| P4 | CrALA1 | 1183 | A8IVJ3 | CHLREDRAFT_172401 |
| P4 | CrALA2 | 1300 | A8IVJ6 | CHLREDRAFT_190292 |
| P4 | CrALA3 | 1243 | A8J8G96 | CHLREDRAFT_193025 |
| P5A | CrP5A1 | 1168 | A8JI261 | CHLREDRAFT_60708 |
| P5B | CrP5B1 | 1308 | A8I9J21 | CHLREDRAFT_186680 |
| PHYSCOMITRELLA PATENS | ||||
| P1B | PpHMA1 | 902 | A9RNK6 | PHYPADRAFT_117222 |
| P1B | PpHMA2 | 743 | A9S8B91 | PHYPADRAFT_125638 |
| P1B | PpHMA3 | 1004 | A9T8Q3 | PHYPADRAFT_192723 |
| P1B | PpHMA4 | 841 | A9SUQ2 | PHYPADRAFT_215914 |
| P1B | PpHMA5 | 1009 | A9SME3 | PHYPADRAFT_81365 |
| P1B | PpHMA6 | 893 | A9TB46 | PHYPADRAFT_142921 |
| P1B | PpHMA7 | 743 | A9TQB5 | PHYPADRAFT_148958 |
| P2A | PpECA1 | 1060 | A9RZK8 | PHYPADRAFT_179791 |
| P2A | PpECA2 | 1039 | A9SH40 | PHYPADRAFT_184915 |
| P2A | PpECA3 | 1055 | A9SHQ4 | PHYPADRAFT_212461 |
| P2A | PpECA4 | 1000 | A9TIL4 | PHYPADRAFT_222630 |
| P2A | PpECA5 | 1037 | A9TK26 | PHYPADRAFT_223041 |
| P2A | PpSCA1 | 822 | A9T9F0 | PHYPADRAFT_220109 |
| P2B | PpACA1/PCA1 | 1098 | Q70TF0 | PHYPADRAFT_202276 |
| P2B | PpACA2/PCA2 | 1105 | Q70TF1 | PHYPADRAFT_224496 |
| P2B | PpACA3 | 1074 | A9SLT6 | PHYPADRAFT_230135 |
| P2B | PpACA4 | 948 | A9RXA710 | PHYPADRAFT_121055 |
| P2B | PpACA5 | 1035 | A9RZJ8 | PHYPADRAFT_121834 |
| P2D | PpENA1 | 967 | Q7XB51 | |
| P2D | PpENA2 | 1058 | Q7XB50 | |
| P2D | PpENA3 | 963 | C1L359 | PHYPADRAFT_112089 |
| P3A | PpAHA1 | 936 | A9U0N9 | PHYPADRAFT_153928 |
| P3A | PpAHA2 | 465 | A9TU441 | PHYPADRAFT_198308 |
| P4 | PpALA1 | 1219 | A9RVW0 | PHYPADRAFT_205967 |
| P4 | PpALA2 | 1062 | A9S030 | PHYPADRAFT_121975 |
| P4 | PpALA3 | 1229 | A9S076 | PHYPADRAFT_122321 |
| P4 | PpALA4 | 1194 | A9SKC3 | PHYPADRAFT_165384 |
| P4 | PpALA5 | 1251 | A9SY94 | PHYPADRAFT_189702 |
| P4 | PpALA6 | 1262 | A9T6U6 | PHYPADRAFT_88857 |
| P4 | PpALA7 | 1104 | A9T776 | PHYPADRAFT_168461 |
| P4 | PpALA8 | 1151 | A9TDQ8 | PHYPADRAFT_221270 |
| P5A | PpP5A1 | 1178 | A9RG70 | PHYPADRAFT_113743 |
| P5B | PpP5B1 | 435 | A9TN061 | PHYPADRAFT_147950 |
| P5B | PpP5B2 | 1290 | A9SGC2 | PHYPADRAFT_229474 |
| SELAGINELLA MOELLENDORFFII11 | ||||
| P1B | SmHMA1 | 819 | D8RBL1 | SELMODRAFT_89397 |
| P1B | SmHMA2 | 696 | D8QRZ31 | SELMODRAFT_60690 |
| P1B | SmHMA3 | 952 | D8SD62 | SELMODRAFT_114297 |
| P1B | SmHMA4 | 831 | D8SJM4 | SELMODRAFT_118425 |
| P1B | SmHMA5 | 1018 | D8SPX5 | SELMODRAFT_122320 |
| P1B | SmHMA6 | 910 | D8TEP8 | SELMODRAFT_138129 |
| P1B | SmHMA7 | 953 | D8RFP0 | SELMODRAFT_92276 |
| P1B | SmHMA8 | 790 | D8QYH61 | SELMODRAFT_60775 |
| P1B | SmHMA9 | 817 | D8R2L0 | SELMODRAFT_167322 |
| P1B | SmHMA10 | 960 | D8R2W8 | SELMODRAFT_84115 |
| P2A | SmECA1 | 1047 | D8RSK1 | SELMODRAFT_267711 |
| P2A | SmECA2 | 1042 | D8RUH8 | SELMODRAFT_102055 |
| P2A | SmECA3 | 1045 | D8SA88 | SELMODRAFT_112465 |
| P2A | SmECA4 | 1009 | D8SUV3 | SELMODRAFT_158488 |
| P2B | SmACA1 | 1014 | D8QTC2 | SELMODRAFT_437746 |
| P2B | SmACA2 | 1030 | D8QTC3 | SELMODRAFT_266601 |
| P2B | SmACA3 | 1068 | D8T1F8 | SELMODRAFT_129812 |
| P2B | SmACA4 | 1105 | D8S012 | SELMODRAFT_451372 |
| P2B | SmACA5 | 1069 | D8T4Q6 | SELMODRAFT_451597 |
| P3A | SmAHA1 | 875 | D8T8I0 | SELMODRAFT_430150 |
| P3A | SmAHA2 | 952 | D8QT851 | SELMODRAFT_76771 |
| P4 | SmALA1 | 1207 | D8QMQ3 | SELMODRAFT_164122 |
| P4 | SmALA2 | 1157 | D8R8G6 | SELMODRAFT_86830 |
| P4 | SmALA3 | 1109 | D8RG22 | SELMODRAFT_410847 |
| P4 | SmALA4 | 1009 | D8RKR6 | SELMODRAFT_95836 |
| P4 | SmALA5 | 1208 | D8S239 | SELMODRAFT_107016 |
| P4 | SmALA6 | 1221 | D8SBS1 | SELMODRAFT_113552 |
| P4 | SmALA7 | 1153 | D8SGU6 | SELMODRAFT_116847 |
| P4 | SmALA8 | 1184 | D8TF22 | SELMODRAFT_138337 |
| P5A | SmP5A1 | 1109 | D8TBK6 | SELMODRAFT_187116 |
| P5B | SmP5B1 | 1290 | D8SFE9 | SELMODRAFT_445079 |
| P5B | SmP5B2 | 1246 | D8R5P0 | SELMODRAFT_439526 |
| ARABIDOPSIS THALIANA | ||||
| P1B | AtHMA1 | 819 | Q9M3H5 | At4g37270 |
| P1B | AtHMA2 | 951 | Q9SZW4 | At4g30110 |
| P1B | AtHMA3 | 760 | P0CW78 | At4g30120 |
| P1B | AtHMA4 | 1172 | O64474 | At2g19110 |
| P1B | AtHMA5 | 995 | Q9SH30 | At1g63440 |
| P1B | AtHMA6/PAA1 | 949 | Q9SZC9 | At4g33520 |
| P1B | AtHMA7/RAN1 | 1001 | Q9S7J8 | At5g44790 |
| P1B | AtHMA8/PAA2 | 856 | Q9C594 | At5g21930 |
| P2A | AtECA1 | 1061 | P92939 | At1g07810 |
| P2A | AtECA2 | 1054 | O23087 | At4g00900 |
| P2A | AtECA3 | 998 | Q9SY55 | At1g10130 |
| P2A | AtECA4 | 1061 | Q9XES1 | At1g07670 |
| P2B | AtACA1 | 1020 | Q37145 | At1g27770 |
| P2B | AtACA2 | 1014 | O81108 | At4g37640 |
| P2B | AtACA4 | 1030 | O22218 | At2g41560 |
| P2B | AtACA7 | 1015 | O64806 | At2g22950 |
| P2B | AtACA8 | 1074 | Q9LF79 | At5g57110 |
| P2B | AtACA9 | 1086 | Q9LU41 | At3g21180 |
| P2B | AtACA10 | 1069 | Q9SZR1 | At4g29900 |
| P2B | AtACA11 | 1025 | Q9M2L4 | At3g57330 |
| P2B | AtACA12 | 1033 | Q9LY77 | At3g63380 |
| P2B | AtACA13 | 1017 | Q9LIK7 | At3g22910 |
| P2B | – | 1049 | F4KHQ212 | At5g53010 |
| P3A | AtAHA1 | 949 | P20649 | At2g18960 |
| P3A | AtAHA2 | 948 | P19456 | At4g30190 |
| P3A | AtAHA3 | 949 | P20431 | At5g57350 |
| P3A | AtAHA4 | 960 | Q9SU58 | At3g47950 |
| P3A | AtAHA5 | 949 | Q9SJB3 | At2g24520 |
| P3A | AtAHA6 | 949 | Q9SH76 | At2g07560 |
| P3A | AtAHA7 | 961 | Q9LY32 | At3g60330 |
| P3A | AtAHA8 | 948 | Q9M2A0 | At3g42640 |
| P3A | AtAHA9 | 954 | Q42556 | At1g80660 |
| P3A | AtAHA10 | 947 | Q43128 | At1g17260 |
| P3A | AtAHA11 | 956 | Q9LV11 | At5g62670 |
| P3A | – | 813 | Q9T0E013 | At4g11730 |
| P4 | AtALA1 | 1158 | P98204 | At5g04930 |
| P4 | AtALA2 | 1107 | P98205 | At5g44240 |
| P4 | AtALA3 | 1213 | Q9XIE6 | At1g59820 |
| P4 | AtALA4 | 1216 | Q9LNQ4 | At1g17500 |
| P4 | AtALA5 | 1228 | Q9SGG3 | At1g72700 |
| P4 | AtALA6 | 1240 | Q9SLK6 | At1g54280 |
| P4 | AtALA7 | 1247 | Q9LVK9 | At3g13900 |
| P4 | AtALA8 | 1189 | Q9LK90 | At3g27870 |
| P4 | AtALA9 | 1200 | Q9SX33 | At1g68710 |
| P4 | AtALA10 | 1202 | Q9LI83 | At3g25610 |
| P4 | AtALA11 | 1203 | Q9SAF5 | At1g13210 |
| P4 | AtALA12 | 1184 | P57792 | At1g26130 |
| P5A | AtP5A1 | 1179 | Q9LT02 | At5g23630 |
1Fragment.
2A possible chimera. The last 200 amino acid residues do not match AtAHA4. Similarity ends at the position equivalent to position 862 in AtAHA4.
3Possibly a fragment. Maybe 80 amino acid residues missing from C-terminus (when compared to AtAHA2). The similarity extends to position 864 in AtAHA2.
4A possible fragment or pseudogene. When compared to AtHMA8/PAA1, positions 523–827 are missing (this includes the motif DKTGT). The last 60 amino acid residues are also missing.
5200 amino acid residues from the C-terminal are missing.
6No corresponding UniProtKB entry.
7When compared to AtACA9, amino acid residues 1–170 are missing.
8Fragment with insert. Similar to AtACA10 (107–529 + 576–1046; the positions on C. reinhardtii 3–462 + 856–1347). The UniProtKB entry only covers part of the protein taken from Phytozome.
9Possibly a pseudogene or chimera. Partly covered by A8I6H0 (460–576) and A8I6H2 (1521–1622). Many regions of low complexity. Similar to AtAHA10 (58–209 + 584–974, AtAHA10 numbering).
10First 130 aa missing compared to AtACA8.
11Near identical copies of most S. moellendorffii genes are present in databases indicating co-sequencing of two related cultivars.
12This protein is not likely to function as an ATPase as several key features are missing including core sequence 2 (TGES− > TASD), core seq. 4 (PEGL− > PVGL, core seq. 5 (the entire intron including DKTGTLT is missing), core sequence 6 (TGDN− > TDND), and core sequence 7 (VVAVTGDGTNDAPAL− > IVAATGMGIHDPKTL). cDNA: AY078942 (613–1049, but different splice variant), CB264713 (772–980), this splice variant. Probably similar to PMAX.
13Probable pseudogene (Axelsen and Palmgren, 2001).