| Number of total reads |
915,782 |
| Total Megabases |
291.04 |
| Average read length (bp) |
317.8 |
| N50 read length (bp) |
396 |
| Number of high quality reads (after filtering) |
915,256 (99.94%) |
| Total Megabases (after filtering) |
271.95 |
| Average read length (after filtering) |
297.14 |
| N50 read length (after filtering) |
381 |
|
Assembly statistics
|
|
| Number of reads assembled |
733,411 (80.13%) |
| Number of contigs |
55,404 |
| Total consensus Megabases |
37.2 |
| Average contig coverage |
4.4 |
| Average contig length |
671.3 |
| N50 contig length |
756 |
| Range contig length |
40–6,821 |
| Number of contigs >500 pb |
31,764 (57.33%) |
| Number of contigs with 2 reads |
21,270 (38.39%) |
| Number of contigs with >2 reads |
34,134 (61.61%) |
| Number of clusters |
41,870 |
| Number of clusters with 1 contig |
39,578 (94.53%) |
| Number of clusters with >1 contig |
2,292 (5.47%) |
| Number of singletons |
181,845 |
|
Annotation
|
|
| Total number of annotated contigs |
24,845 (44.84%) |
| SwissProt+Metazoan RefSeq hits |
20,175 (81.2%) |
| nr hits |
4,670 (18.8%) |
| Unique protein hits |
12,591 |
| Total number of annotated singletons |
13,722 |
