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. 2012 May 8;2012:541594. doi: 10.1155/2012/541594

Table 3.

Thermodynamics of binding for the 5 complexes of ALR2 calculated using MM-PBSA.

PDB ID  ΔG ele  ΔG vdW  ΔG ele-int ΔG non-polar  ΔG ele-MM ΔG bind ∗   G bind ∗  
(With water) (Without water)
1T40 5.97 −48.31 14.96 −5.67 20.93 −25.24 −21.29
1Z89 −6.92 −44.85 36.83 −4.94 29.91 −53.71 −49.73
2FZ8 5.66 −51.96 21.49 −6.07 27.16 −18.77 −16.23
3H4G 11.81 −45.37 17.53 −5.69 29.34 −44.16 −36.60
3G5E 22.7 −46.89 4.79 −5.44 27.49 −17.55 −14.22

*Estimated by MM-GBSA program of Prime module implemented in Schrodinger maestro package.