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. 2012 May 22;7(5):e37899. doi: 10.1371/journal.pone.0037899

Table 1. Primer and probe sequences and characteristics.

Gene and Genbank (Accession ID) Primers and Probes Sequences Melting Temperature (°C) Location on Gene Sequence (base pairs)
SLC2A1 Forward 5′-TCC CAG TGG CCC AAG GA-3′ 60 1202–1218
(U89029) Reverse 5′-GAT CTA TCA GTT TGA GAG TCT CAT CCA-3′ 58 1239–1265
Probe 6FAM-TCA GAG CGC AGG CAG-MGBNFQ 1223–1237
SLC2A3 Forward 5′-TGC CTT ATG GGA TTC TGC AAA-3′ 59 431–451
(NM_001009770) Reverse 5′-TCA GTC GGC CCA AAA TCA G-3′ 58 473–491
Probe 6FAM-AGC AGA GTC AGT TGA AAT-MGBNFQ 454–471
SLC2A4 Forward 5′-AAC CCA GCA CAG AAC TGG AGT AC-3′ 59 71–93
(AB005283) Reverse 5′-CCT GTG TGG ACC CTC AGT CA-3′ 58 110–130
Probe 5′-AGGGCCGGATGAGA-3′ 96–109
SLC38A4 Forward 5′-TTG TTT ACA CTG AAG GAG CTT GTG T-3′ 59 211–235
(XM_605868) Reverse 5′-CAG TTC CAT GGG ATC CAT TTG-3′ 58 260–280
Probe 6FAM-CAG CGC TTT CTT GTC C-MGBNFQ 238–253
SLC7A1 Forward 5′-CCT AGC GCT CCT GGT CAT CA-3′ 60 271–290
(AF212146) Reverse 5′-GGC GTC CTT GCC AAG TAC A-3′ 58 307–325
Probe 6FAM-CCT TCT GCA TGG CAG C-MGBNFQ 291–306
SLC7A5 Forward 5′-CTC CAT CCT CTC CAT GAT CCA-3′ 58 125–145
(AY162432) Reverse 5′-TGT GAA CAC CAG TGA GGG TAC AG-3′ 59 163–185
Probe 6FAM-CCG CGG CTG CTG A-MGBNFQ 147–159
SLC7A8 Forward 5′-GTC AGA GCC CGT GGT GTG T-3′ 58 205–223
(AY162433) Reverse 5′-TGC CAG TAA ATA CCC AGG AAG TAG A-3′ 59 261–285
Probe 6FAM-CCA TCA TGG TGA CAG GG-MGBNFQ 237–253
mTOR Forward 5′-CTG CAC GTC AGC ACC ATC A-3′ 59 3772–3790
(XM_001788228) Reverse 5′-AGC CAT TCC AAC CAA TCA TCT T-3′ 58 3830–3851
Probe 6FAM-CCT CCA AAA GGC C-MGBNFQ 3792–3804
Cyclophilin A Forward 5′- GTA CTG GTG GCA AGT CCA TCT -3′ 105–125
(AY251270.1) Reverse 5′- CAG GAC CTG TAT GCT TCA GAA TGA -3′ 153–176
Probe 6FAM- ATG GCG AGA AAT TTG-MGBNFQ 126–140
Beta actin Forward 5′- ACC AGT TCG CCA TGG ATG ATG -3′ 76–96
(NM_001009784.1) Reverse 5′- CCG GAG CCG TTG TCA AC -3′ 113–128
Probe 6FAM- ACG AGC GCA GCA ATA T –MGBNFQ 97–112
GAPDH Forward 5′- GGG CTG CTT TTA ATA CTG GCA AA -3′ 91–114
(NM_001190390) Reverse 5′- CAT GTA GAC CAT GTA GTG AAG GTC AA -3′ 146–171
Probe 6FAM- CAT CGT TGC CAT CAA TG –MGBNFQ 120–136
YWHAZ Forward 5′- GAG GGT CGT CTC CAG TAT TGA G -3′ 25–46
(AY970970.1) Reverse 5′- TTC TCG AGC CAT CTG CTG TTT T -3′ 70–91
Probe 6FAM- CAG CAC CTT CCG TCT TT –MGBNFQ 49–65
HPRT1 Forward 5′- AGG TGT TTA TTC CTC ATG GAC TAA TTA TGG -3′ 1–30
(EF078978) Reverse 5′- CAC CCA TCT CCT TCA TCA CAT CTC -3′ 52–75
Probe 6FAM- ACA GGA CCG AAC GAC TG –MGBNFQ 31–47
RPL19 Forward 5′-CAA AAA CAA GCG GAT TCT CAT G -3′ 340–361
(AY158223.1) Reverse 5′- GCT TCT TGC GAG CCT TGT CT -3′ 385–404
Probe 6FAM- AAC ATA TCC ACA AGC TGA A –MGBNFQ 363–381
18S Eukaryotic 18S rRNA endogenous VIC/MGB Probe and Primers (Applied Biosystems, Foster City, CA, USA)