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. 2012 May 23;3:79. doi: 10.3389/fgene.2012.00079

Table 3.

Formal IMGT-ONTOLOGY axioms, IMGT-ONTOLOGY concepts, IMGT® standards, and external resources.

Formal IMGT- ONTOLOGY axioms IDENTIFICATION DESCRIPTION CLASSIFICATION NUMEROTATION
IMGT-ONTOLOGY conceptsa Concepts of identificationb (/1491) Concepts of descriptionc Concepts of classificationd Concepts of numerotatione,f
IMGT® standards IMGT® standardized keywords IMGT® standardized labels IMGT® standardized IG and TR gene names IMGT unique numbering
IMGT Colliers de Perles
External resources (ontologies, databases, and tools) NCI Thesaurus (/1032)
Logical Observation Identifier Names and Codes (LOINC) (/1350)
Molecule role (INOH Protein name/family name ontology) (IMR) (/1029)
National Drug File Reference Terminology (NDRFT) (/1352)
Sequence types and features (SO) (/1109)
SNP-Ontology (/1058)
HUGO (/1528)
NCI Metathesaurus (/1499)
HGNC (Bruford et al., 2008)
NCBI gene (Maglott et al., 2011)
Ensembl (Hubbard et al., 2002)
Vega (Wilming et al., 2008)
IgBlast

(/number) indicates, for ontologies at NCBO BioPortal, the identifiant to be added to http://bioportal.bioontology.org/ontologies.

aGiudicelli and Lefranc (1999), Lefranc et al. (2004, 2005a, 2008), Duroux et al. (2008), Lefranc (2013).

b–fLefranc (2011b,c,d,e,f).