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. 2012 May 23;7(5):e37010. doi: 10.1371/journal.pone.0037010

Table 2. Cellulase and xylanase from the thermophilic community identified by proteomics.

Predicted Function Source Organism IMG gene_oid Protein (AA) pfam pfam info
Endoglucanase Paenibacillus 2061998357 768 00759; 00942 Glyco_hydro_9; CBM_3
Endoglucanase Paenibacillus 2062016312 542 00759; 02927 Glyco_hydro_9; CelD_N
1,4-beta-cellobiosidase Paenibacillus 2062032019 770 02011 Glyco_hydro_48
Cellulase/beta-1,4-mannanase No match 2061990256 518 00150; 00942 Glyco_hydro_5; CBM_3
Beta-1,4-xylanase Paenibacillus 2061982776 581 00331; 02018 Glyco_hydro_10; CBM_4_9
Alpha-L-arabinofuranosidase Paenibacillus 2061991733 496 6964 Alpha-L-AF_C

Predicted function of the proteins identified by proteomics is based on comparisons of the genes in the metagenome to the pfam, Clusters of Orthologous Groups (COGs), and the Kyoto Encyclopedia of Genes and Genomes (KEGG) databases. The IMG gene oid is the gene identifier for The Joint Genome Institute's Integrated Microbial Genomes database http://img.jgi.doe.gov/. The pfam assignment of the metagenome gene is indicated.