Table 3. Replication results with the dbGap sample.
| Chromosome | SNP and tagged gene | Model | Case | Control | Chi-square (χ2) | df | P |
|---|---|---|---|---|---|---|---|
| 1 | rs6428830 (HSD3B1) | Allelic | 1003/2579 | 1109/2503 | 6.332 | 1 | 0.012 |
| Dominant | 866/925 | 941/865 | 5.062 | 1 | 0.024 | ||
| Genotypic | 137/729/925 | 168/773/865 | 6.388 | 2 | 0.041 | ||
| rs7553527 (HSD3B1) | Allelic | 1577/1947 | 1519/2061 | 3.888 | 1 | 0.049 | |
| 4 | rs12649976 (PDLIM5) | Recessive | 310/1476 | 265/1539 | 4.748 | 1 | 0.029 |
| rs13135257 (PDLIM5) | Recessive | 307/1469 | 263/1530 | 4.556 | 1 | 0.033 | |
| rs17021917 (PDLIM5) | Dominant | 44/1745 | 26/1781 | 4.906 | 1 | 0.027 | |
| Allelic | 44/3534 | 26/3588 | 4.858 | 1 | 0.028 | ||
| 7 | rs4988498 (INMT) | Recessive | 3/1750 | 12/1756 | 5.346 | 1 | 0.021 |
| 8 | rs505138 (ADRA1A) | Genotypic | 15/285/1483 | 7/358/1432 | 12.03 | 2 | 0.002 |
| Dominant | 300/1483 | 365/1432 | 7.191 | 1 | 0.007 | ||
| Allelic | 315/3251 | 372/3222 | 4.75 | 1 | 0.029 | ||
| 12 | rs1168658 (PSMD9) | Trend | 997/2565 | 934/2666 | 3.894 | 1 | 0.048 |
| rs7313252 (PSMD9) | Allelic | 1720/1774 | 1638/1892 | 5.616 | 1 | 0.018 | |
| Dominant | 1300/447 | 1256/509 | 4.686 | 1 | 0.030 |
Abbreviation: SNP, single-nucleotide polymorphism.