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. 2012 May 24;8(5):e1002714. doi: 10.1371/journal.pgen.1002714

Table 1. Significant interactions on HDL-C in multi-ethnic cohorts.

Test Stage Cohorta SNP 1 SNP 2 Pc d
chr posb rsID Genec chr posb rsID Genec
Discovery ARIC EA 5 74656539 rs12916 HMGCR (3′ UTR) 15 58683366 rs1532085 40.8 k U LIPC 0.008
Fine Mapping ARIC EA 5 74651084 rs3846662 HMGCR (Intron) 15 58680954 rs2043085 43.2 k U LIPC 0.002
Validation MESA EA 5 74651084 rs3846662 HMGCR (Intron) 15 58582540 rs1973688 141.6 k U LIPC 0.006
Validation FHS EA 5 74651864 rs55727654 HMGCR (Intron) 15 58666341 rs473422 57.8 k U LIPC 0.002
Validation MESA HA 5 74602699 rs1423527 30.3 k U HMGCR 15 58718340 rs7163280 5.8 k U LIPC 0.04
Validation ARIC AA 5 74685520 rs3761743 27.6 k D HMGCR 15 58736623 rs567838 LIPC (Intron) 0.004
a

EA denotes European American; HA denotes Hispanic American; AA denotes African American.

b

Build 37.1 (GRCh37).

c

U indicates upstream of; D indicates downstream of.

d

P-value after Bonferroni correction.