Table 1. Significant interactions on HDL-C in multi-ethnic cohorts.
Test Stage | Cohorta | SNP 1 | SNP 2 | Pc d | ||||||
chr | posb | rsID | Genec | chr | posb | rsID | Genec | |||
Discovery | ARIC EA | 5 | 74656539 | rs12916 | HMGCR (3′ UTR) | 15 | 58683366 | rs1532085 | 40.8 k U LIPC | 0.008 |
Fine Mapping | ARIC EA | 5 | 74651084 | rs3846662 | HMGCR (Intron) | 15 | 58680954 | rs2043085 | 43.2 k U LIPC | 0.002 |
Validation | MESA EA | 5 | 74651084 | rs3846662 | HMGCR (Intron) | 15 | 58582540 | rs1973688 | 141.6 k U LIPC | 0.006 |
Validation | FHS EA | 5 | 74651864 | rs55727654 | HMGCR (Intron) | 15 | 58666341 | rs473422 | 57.8 k U LIPC | 0.002 |
Validation | MESA HA | 5 | 74602699 | rs1423527 | 30.3 k U HMGCR | 15 | 58718340 | rs7163280 | 5.8 k U LIPC | 0.04 |
Validation | ARIC AA | 5 | 74685520 | rs3761743 | 27.6 k D HMGCR | 15 | 58736623 | rs567838 | LIPC (Intron) | 0.004 |
EA denotes European American; HA denotes Hispanic American; AA denotes African American.
Build 37.1 (GRCh37).
U indicates upstream of; D indicates downstream of.
P-value after Bonferroni correction.