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. 2012 May 24;7(5):e37853. doi: 10.1371/journal.pone.0037853

Table 4. Results of selection analyses per branches.

Region Branch Subregion ORF Covariation
R1 PVYN strain 116–124 P1 121
160–165
205–214 214
240–245 241
PVYO strain 116–124 121
208–214 214
PVY-MN 151–157
209–214 214
NC57 199–209
213–223 214
264–269
Z16 585–591 HC-Pro
R2 Z16 757–763 P3 761
NC57 931–949 936, 939, 943, 946, 947
Chile3 1053–1060
1094–1100 1094
Gpost 1436–1442 CI
R3 SON41 2247–2250 NIa-Pro
NC57 2370–2378 NIb 2373
PVY-MN 2859–2865 CP

For each region under study, branches showing positive selection, location of amino acid subregions involved and ORFs are indicated. For terminal branches, the name of the corresponding isolate is shown, whereas for internal branches the strain subjected to the selection event is indicated. Covarying positions detected in the previous analyses falling into the subregions providing a positive selection signature are shown in the last column. (P<0.0001 for all subregions).