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. 2012 Mar 14;8:28. doi: 10.1186/1746-6148-8-28

Table 2.

Characteristics and performance data of the primers used for reference gene-stability measure M and quantitative real-time PCR analysis

Gene Forward primer (from 5' to 3') PCR product NCBI GenBank Slope R2 Efficiency M
Reverse primer (from 5' to 3')
Reference genes
ACTB ACTTGCGCAGAAAACGAGAT 120 AY141970 -0.30 0.99 1.99 0.039
CACCTTCACCGTTCCAGTTT
SDHA GCAGAACCTGATGCTTTGTG 185 NM_174178 -0.24 0.99 1.74 0.048
CGTAGGAGAGCGTGTGCTT
ATP5B GGACTCAGCCCTTCAGCGCC 229 NM_175796.2 -0.16 0.99 1.44 0.039
GCCTGGTCTCCCTGCCTTGC
RPS9 GTGAGGTCTGGAGGGTCAAA 108 BC148016 -0.31 0.99 2.04 0.040
GGGCATTACCTTCGAACAGA
PPIA GGCAAATGCTGGCCCCAACACA 87 NM_178320.2 -0.34 0.99 2.13 0.034
AGTACCACGTGCTTGCCATCCA
RPL12 CACCAGCCGCCTCCACCATG 84 NM_205797.1 -0.35 0.99 2.25 0.036
CGACTTCCCCACCGGTGCAC
Target genes
ACADM GCGAGTACCCTGTCCCATTA 243 NM_001075235 -0.29 0.99 1.93
CCTCAGTCATTCTCCCCAAA
ACOX1 CCATTGCCGTCCGATACAGT 99 BC102761 -0.27 0.96 1.88
GTTTATATTGCTGGGTTTGATAATCCA
ALDH9A1 CAGGATTCGGCAGAGAGAAC 229 NM_001046423 -0.28 0.99 1.90
TGAGCCATGAAGAGCATCAC
BBOX1 TCCAGCTGCCTACTCTGGAT 292 BC149884.1 -0.28 0.99 1.91
AGCTGAACCTTACCCCAGGT
CD36 GCATTCTGAAAGTGCGTTGA 179 BC103112 -0.28 0.98 1.91
CGGGTCTGATGAAAGTGGTT
CPT1A CAAAACCATGTTGTACAGCTTCCA 111 FJ415874 -0.32 0.99 2.09
GCTTCCTTCATCAGAGGCTTCA
HMGCS2 GCCCAATATGTGGACCAAAC 209 NM_001045883 -0.29 0.99 1.96
ATGGTCTCAGTGCCCACTTC
PPARA GGTGGAGAGTTTGGCAGAACCAGA 168 BT020756.1 -0.23 0.99 1.70
TCCCACTGCCCAGCTCCGATC
SLC22A5 CACAGTGGTCAGGAACATGG 181 BC105377 -0.28 0.99 1.89
AATGGTGTCTGGGAGTGGAG
SLC27A1 CTGAAGGAGACCTCCACAGC 208 NM_001033625.2 -0.30 0.99 1.99
GTGGTACAGGGGCAGACAGT
TMLHE TGGCAGGACACTGCTAGTTG 222 NM_001076064.1 -0.31 0.99 2.05
GACAGCCCGGTCATAGTTGT