Table 6. Detailed information related to the SNP markers linked to QTL associated with growth and stress response.
| Phenotype | SNP Name | Accession Number | GI | Variation | Ts/Tv | C/NC | S/NS | LG | Available Annotation |
|---|---|---|---|---|---|---|---|---|---|
| Growth | |||||||||
| Size | sf000071 | A/C | Tv | NC | − | 3 | − | ||
| Size | sf003018 | A/G | Ts | NC | − | 26 | − | ||
| Size | sf003084 | A/G | Ts | C | − | 4 | − | ||
| Size | sf003334 | A/G | Ts | NC | S | 24 | − | ||
| Fulton index | sf003442 | A/G | Ts | C | S | 24 | − | ||
| Hepatic glycogen | sf004038 | NM_001165151 | GI:259089170 | A/G | Ts | NC | − | 34 | Ubiquitin-conjugating enzyme E2W |
| Size | sf004055 | XP_001921123 | GI:189530039 | A/T | Tv | C | NS | 22 | Neural-cadherin-like |
| igf1 mRNA level | sf004560 | G/T | Tv | NC | − | 3 | − | ||
| Plasma glucose | sf004715 | C/T | Ts | C | S | 10 | − | ||
| SGR | sf004732 | AB258536 | GI:118596560 | C/T | Ts | NC | − | 29 | Onmy-LDA gene for MHC class I antigen |
| Liver fresh weight | sf004811 | EU025709 | GI:158702304 | A/T | Tv | C | NS | 15 | − |
| Hepatic glycogen | sf004818 | EU481821 | GI:171474994 | A/C | Tv | NC | − | 2 | Formin-binding protein 1 |
| Stress response | |||||||||
| Plasma cortisol | sf003382 | A/G | Ts | C | NS | 14 | − | ||
| Plasma cortisol | sf004319 | BT058994 | GI:223647897 | G/T | Tv | C | S | 23 | Hydroxymethylglutaryl-CoA lyase, mitochondrial precursor putative mRNA |
SNP, single nucleotide polymorphism; QTL, quantitative trait loci; GI, GenInfo identifiers; Ts, transition; Tv, transversion; C, coding region; NC, noncoding region; S, synonymous; NS, nonsynonymous; LG, linkage group.