Table 3. Top Pfam domains identified in Chilo suppressalis midgut sequences.
Pfam accession | Pfam domain description | Number of occurrence in midgut |
PF00096.20 | Zinc finger, C2H2 type | 542 |
PF00400.26 | WD domain, G-beta repeat | 394 |
PF00069.19 | Protein kinase domain | 152 |
PF00076.16 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 149 |
PF00078.21 | Reverse transcriptase (RNA-dependent DNA polymerase) | 130 |
PF07679.10 | Immunoglobulin I-set domain | 108 |
PF00135.22 | Carboxylesterase family | 99 |
PF00560.27 | Leucine Rich Repeat | 95 |
PF00435.15 | Spectrin repeat | 93 |
PF00089.20 | Trypsin | 84 |
PF00083.18 | Sugar (and other) transporter | 83 |
PF07690.10 | Major Facilitator Superfamily | 81 |
PF00153.21 | Mitochondrial carrier protein | 79 |
PF00067.16 | Cytochrome P450 | 70 |
PF12796.1 | Ankyrin repeats (3 copies) | 70 |
PF00106.19 | short chain dehydrogenase | 62 |