Table 3.
First author | Label | r | rank | bias | MSE |
---|---|---|---|---|---|
Shariati | BayesS_1 | 0.84 | 0.48 | 0.33 | 12.92 |
BayesS_2 | 0.84 | 0.47 | 0.33 | 12.94 | |
BayesS_3 | 0.83 | 0.49 | 0.33 | 13.37 | |
BayesS_4 | 0.82 | 0.49 | 0.32 | 13.62 | |
Ogutu | RR | 0.83 | 0.52 | 0.45 | 5.55 |
GBLUP_O | 0.81 | 0.51 | 0.39 | 8.23 | |
LASSO_O | 0.87 | 0.55 | 0.43 | 6.44 | |
LASSO_ad | 0.88 | 0.60 | 0.37 | 9.94 | |
EN | 0.87 | 0.52 | 0.44 | 5.86 | |
EN_ad | 0.81 | 0.48 | 0.33 | 12.01 | |
Wang | BayesA_W | 0.86 | 0.61 | 0.38 | 9.07 |
BayesB_W | 0.89 | 0.66 | 0.38 | 9.12 | |
BayesCπ_W | 0.88 | 0.65 | 0.39 | 9.00 | |
TABLUP | 0.88 | 0.64 | 0.36 | 10.88 | |
GBLUP_W | 0.77 | 0.48 | 0.46 | 4.98 | |
Mucha | AM | 0.59 | 0.37 | 0.40 | 5.93 |
FM | 0.47 | 0.44 | 0.13 | 43.01 | |
RM1 | 0.70 | 0.34 | 0.68 | 2.54 | |
RM2 | 0.70 | 0.34 | 0.65 | 2.68 | |
Zeng | GBLUPa_Z | 0.82 | 0.50 | 0.40 | 7.61 |
GBLUPd_Z | 0.81 | 0.49 | 0.40 | 7.59 | |
BayesB _W | 0.89 | 0.66 | 0.38 | 9.22 | |
BayesCπ_W | 0.89 | 0.66 | 0.39 | 8.84 | |
Usai | LASSO_Uc | 0.86 | 0.53 | 0.45 | 5.66 |
LASSO_Uc1 | 0.86 | 0.62 | 0.37 | 9.54 | |
LASSO_Uc2 | 0.87 | 0.55 | 0.43 | 6.48 | |
Schurink | BayesZ | 0.87 | 0.63 | 0.39 | 5.20 |
(r=Pearson correlation between TBV and GEBV, rank=rank correlation of the best 10% TBV, bias = regression coefficient between TBV and GEBV, MSE= mean squared error of prediction of TBV by GEBV)