Table 2. Genetic diversity indices and demographical analyses for cyt b sequences in Apodemus draco.
mtDNA clades | n | H | h (SD) | π (SD) | Fu’s Fs | R2 | Mismatch distribution | r | SSD |
Clade 1 | 56 | 31 | 0.951 | 0.0066 | −12.969 | 0.065 | – | 0.008 | 0.006 |
Subclade 1A | 28 | 15 | 0.902 | 0.0025 | −8.201 | 0.064 | unimodal | 0.020 | 0.001 |
Subclade 1B | 18 | 7 | 0.752 | 0.0016 | −2.068 | 0.104 | unimodal | 0.110 | 0.023 |
Subclade 1C | 10 | 9 | 0.978 | 0.0042 | −4.067 | 0.139 | multimodal | 0.069 | 0.016 |
Clade 2 | 13 | 3 | 0.500 | 0.0010 | 0.930 | 0.164 | multimodal | 0.679 | 0.173 |
Clade 3 | 21 | 15 | 0.957 | 0.0050 | −5.779 | 0.081 | multimodal | 0.016 | 0.009 |
Clade 4 | 30 | 21 | 0.968 | 0.0084 | −6.044 | 0.112 | multimodal | 0.013 | 0.008 |
Clade 5 | 6 | 6 | 1.000 | 0.0064 | −1.606 | 0.257 | multimodal | 0.071 | 0.046 |
Total | 126 | 76 | 0.982 | 0.0381 | −8.413 | 0.108 | – | 0.002 | 0.012 |
Number of individuals (n), number of haplotypes (H), haplotype diversity (h), nucleotide diversity (π), Fu’s Fs, Ramos-Onsins and Rozas’s R2 statistics (R2), the shape of mismatch distribution, the sum of squared deviations (SSD) and raggedness indexes (r) are shown. Numbers in bold indicate statistically significant genetic differentiation (P<0.05).