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. 2012 May 31;8(5):e1002534. doi: 10.1371/journal.pcbi.1002534

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A: Three components of as functions of for a symmetric template model for which the mean field theory is exact. The rates were given by , , , and for A, U, G, C. Lines are from Eq. (40). Symbols are from numerical simulations. B: Test of site-independence for the sequence distribution, Eq. (35), with pol rates (Table 2F). All symbols were calculated from numerical simulations. C–D: Mean velocity (C) and error rate (D) for the pol kinetics, both with full experimental kinetics (Table 2) and Jukes-Cantor version (JC) derived from the full kinetic set. Symbols are from simulations, which verify that for JC kinetics the mean field prediction is exact.

Inline graphic — A: Three components of as functions of for a symmetric template model for which the mean field theory is exact. The rates were given by , , , and for A, U, G, C. Lines are from Eq. (40). Symbols are from numerical simulations. B: Test of site-independence for the sequence distribution, Eq. (35), with pol rates (Table 2F). All symbols were calculated from numerical simulations. C–D: Mean velocity (C) and error rate (D) for the pol kinetics, both with full experimental kinetics (Table 2) and Jukes-Cantor version (JC) derived from the full kinetic set. Symbols are from simulations, which verify that for JC kinetics the mean field prediction is exact.