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. 2012 May 31;7(5):e38200. doi: 10.1371/journal.pone.0038200

Table 4. GO terms associated with binding motifs identified via FastMEDUSA.

Motif Logo Predictions Top 5 specific predictions
AATCGCTT 36 MF olfactory receptor activity
BP sensory perception of smell
MF RNA binding
CC spliceosomal complex
BP chromosome segregation
AATGGAC 21 MF olfactory receptor activity
BP sensory perception of smell
BP G-protein coupled receptor protein signaling pathway
BP innate immune response
MF taste receptor activity
ACAGAGG 146 CC extracellular space
CC integral to plasma membrane
MF calcium ion binding
MF hormone activity
BP cell adhesion
ACCAGAGCT 52 CC integral to plasma membrane
CC extracellular space
MF heme binding
BP excretion
CC keratin filament
ACGTGAT 57 MF olfactory receptor activity
BP sensory perception of smell
BP intracellular protein transport
MF RNA binding
BP DNA repair
ACGTTCG 408 CC nucleolus
CC spliceosomal complex
BP rRNA processing
MF structural constituent of ribosome
MF translation regulator activity
AGATTTC 28 MF olfactory receptor activity
BP sensory perception of smell
BP G-protein coupled receptor protein signaling pathway
BP innate immune response
BP inflammatory response
ATCGCTA 114 MF olfactory receptor activity
BP sensory perception of smell
CC mitochondrial matrix
MF RNA binding
BP ncRNA metabolic process
ATGCCCC 112 BP regulation of striated muscle contraction
BP regulation of signal transduction
CC terminal button
BP cardiac muscle tissue morphogenesis
CC keratin filament
ATTGTTCCA 64 MF olfactory receptor activity
BP sensory perception of smell
BP G-protein coupled receptor protein signaling pathway
BP inflammatory response
BP regulation of lymphocyte mediated immunity
CGCTAGA 158 BP nuclear mRNA splicing, via spliceosome
CC spliceosomal complex
CC nucleolus
BP rRNA processing
MF structural constituent of ribosome
CTGGAACT 0
GAAATCT 34 MF olfactory receptor activity
BP sensory perception of smell
BP G-protein coupled receptor protein signaling pathway
BP innate immune response
BP inflammatory response
TAATCGCTG 5 MF olfactory receptor activity
BP sensory perception of smell
TACGTTCT 37 MF olfactory receptor activity
BP sensory perception of smell
BP G-protein coupled receptor protein signaling pathway
BP response to stimulus
MF unfolded protein binding
TAGAACG 71 MF olfactory receptor activity
BP sensory perception of smell
MF RNA binding
BP nuclear mRNA splicing, via spliceosome
MF structural constituent of ribosome
TCAGAGAA 94 MF olfactory receptor activity
BP sensory perception of smell
BP G-protein coupled receptor protein signaling pathway
CC extracellular space
BP immune response
TCCAGAGG 70 CC integral to plasma membrane
CC extracellular space
CC proteinaceous extracellular matrix
MF calcium ion binding
BP regulation of monooxygenase activity