Table 1.
Parameters used in the algorithms.
| Anisotropic filtering | Dimension reduction | ||
|---|---|---|---|
| Scan range | 10 | Number of iterations | 45 |
| τ | 2 | α | 2 |
| Number of steps | 2 | Stopping dimension | 1.2 |
| λ | 0.1 | Number of nearest neighbors | 20 |
| Anisotropic coefficients | [1 0 0] | MOMENT OF INERTIA | |
| TUBING | Number of nearest neighbors | 20 | |
| Standard deviation (μm) | 1.0 | IMAGE COMPARISON | |
| THRESHOLDING | Maximum distance, projection (μm) | 5 | |
| Threshold, projection | 10/255 | Maximum angle, projection (deg) | 20 |
| Threshold, cell body | ½ of max intensity | Maximum distance, cell body (μm) | 20 |
| IMAGE CONVOLUTION | |||
| Volume (μm) | 3.28 × 3.28 × 4.26 | ||