Table 4. Assembly statistics (calculated on contigs > = 100 bp) for Actinomyces naeslundii MG1 in sample H1 and H2.
Reference genome | Length | Sample | # Contigs | Total length | Depth of coverage | Max Contig | N50 | N90 |
Actinomyces naeslundiiMG1 | ∼3Mbp | H1 | 2850 | ∼2.8Mbp | 6.2 | 14.5 Kbp | 1.7 Kbp | 0.1 Kbp |
H2 | 1168 | ∼2.9Mbp | 24.3 | 28.6 Kbp | 5.5 Kbp | 0.9 Kbp |
The N50 and N95 are calculated based on the MG1 genome size.