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. 2012 Jun 4;7(6):e37984. doi: 10.1371/journal.pone.0037984

Table 4. Oligonucleotide primers used in this study.

No. Primer Sequence (5′ to 3′)* Use
424 GCGAATTCCCGCTGGCTCGTTGGAACCG Forward primer for creating pCNY506
425 GCGTCGACTTAGTGATGGTGATGGTGATGCCGGCTGAGGCGCTTCGC Reverse primer for creating pCNY506
225 CTATCCGCATATGGCCCAACTAAAATTTAAC Forward primer for creating pMS0125
226 CGACTCGAGTTACCGGCTGAGGCGCTTCG Reverse primer for creating pMS0125
207 CGTGGGATCCCGTGCGATGTTGCGTCGTG Forward primer for creating pKS2084
45 GATCTCGAGTCACTCTTTCTCGGAGTAACTATAAC Reverse primer for creating pKS2084
263 ACCGTCAATGGTATGGTC Forward primer for creating etk::kan in AP1417
264 CGTTTTACCACTGTCTGG Reverse primer for creating etk::kan in AP1417
475 CGGGAAACGTTTGCAGCGGTGTACACATTACTTGAACGGTCTGCCCGCCAcaagagggtcattatatttcg Forward primer for creating Δwzc::tet
476 AGGTAGGTCGGATAAGATGCGTCAGCATCGCATCCGACAGCGGATGTCGactcgacatcttggttaccg Reverse primer for creating Δwzc::tet
480 GAAAGAGATCCCGGCTCCCTATCGTAAAAG Forward primer for EtpD119A substitution in pCNY507
481 CTTTTACGATAGGGAGCCGGGATCTCTTTC Reverse primer for EtpD119A substitution in pCNY507
298 GATCCCGGATCCCTTTCGTAAAAGTCAGG Forward primer for EtpY121F substitution in pCNY508
299 CCTGACTTTTACGAAAGGGATCCGGGATC Reverse primer for EtpY121F substitution in pCNY508
460 GAAAGAGATCCCGGCTCCCTTTCG TAAAAG Forward primer for EtpD119A, Y121F substitutions in pCNY510
461 CTTTTACGAAAGGGAGCCGGGATC TCTTTC Reverse primer for EtpD119A, Y121F substitutions in pCNY510
437 GAGATCCCGGATCCCGAGCGTAAAAGTCAGGACG Forward primer for EtpY121E substitution in pCNY512
438 CGTCCTGACTTTTACGCTCGGGATCCGGGATCTC Reverse primer for EtpY121E substitution in pCNY512
493 GAGATCCCGGATCCCGCGCGTAAAAGTCAGGACG Forward primer for EtpY121A substitution in pCNY513
494 CGTCCTGACTTTTACGCGCGGGATCCGGGATCTC Reverse primer for EtpY121A substitution in pCNY513
58 CAGAAAGAGATCCCGGCTCCCTATCGTAAAAGTCAGG Forward primer for EtpD119A substitution in pAJ0046
59 CCTGACTTTTACGATAGGGAGCCGGGATCTCTTTCTG Reverse primer for EtpD119A substitution in pAJ0046
54 GAGATCCCGGATCCCTTTCGTAAAAGTCAGGACG Forward primer for EtpY121F substitution in pAJ0049
55 CGTCCTGACTTTTACGAAAGGGATCCGGGATCTC Reverse primer for EtpY121F substitution in pAJ0049
49 CAGAAAGAGATCCCGGAGCCCTATCGTAAAAGTCAGG Forward primer for EtpD119E substitution in pAJ2090, pAJ3242
48 CCTGACTTTTACGATAGGGCTCCGGGATCTCTTTCTG Reverse primer for EtpD119E substitution in pAJ2090, pAJ3242
*

Underlined sequences represent restriction enzyme sites, and lower case sequences are regions complementary to the template plasmid containing the antibiotic cassette.