Table 3.
Location (j, k) of the effect ηj,k |
Size of the regulatory effects l = {M, E, ME} |
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---|---|---|---|---|---|---|---|---|---|---|
Pair j | Trait k |
|
|
|
||||||
True value | Estimated |
True value | Estimated |
True value | Estimated |
|||||
sl = 0.013 | sl = 0.09 | sl = 0.013 | sl = 0.09 | sl = 0.013 | sl = 0.09 | |||||
2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.26 | |
3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
4 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
2 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 5.96 | 0 | |
3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
9 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
2 | 0 | 0 | −12.87 | 0 | 0 | −1.46 | 0 | 0 | 7.14 | |
3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
14 | 1 | 0 | 0 | 0 | 6 | 5.78 | 5.52 | 0 | 0 | 0 |
2 | 0 | 0 | −0.2 | 0 | 0 | 0 | 0 | 0 | 0 | |
3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
18 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
3 | 0 | 0 | 0 | 6 | 5.66 | 5.77 | 0 | 0 | 0 | |
21 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
2 | 0 | 0 | 0.26 | 0 | 0 | 0 | 0 | 0 | 0 | |
3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
24 | 1 | 6 | 0.24 | 2.78 | 0 | 0 | 0 | 0 | 0 | 0 |
2 | 6 | 1.09 | 3.40 | 0 | 0 | 0 | 0 | 0 | 0 | |
3 | 6 | 0.46 | 3.50 | 0 | 0 | 0 | 0 | 0 | 0 |
A bold font is used to indicate positions where the true or estimated effect was non-zero The shaded cells indicate false positives and false negatives.