Table 7.
Pair j | Size of the regulatory effects l = {M, E, ME} |
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---|---|---|---|---|---|---|---|---|---|
|
|
|
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True value | Estimated |
True | Estimated |
True value | Estimated |
||||
sl = 0.0033 | sl = 0.013 | sl = 0.0033 | sl = 0.013 | sl = 0.0033 | sl = 0.013 | ||||
(A) MD2, TRAIT 1, 10% G, 10% E CODED AS MISSING | |||||||||
3 | 0 | 0.21 | 0.30 | 0 | 0 | 0 | 0 | 0 | 0 |
6 | 0 | 0.28 | 0.41 | 0 | 0 | 0 | 0 | 0 | 0 |
9 | 0 | 0 | 0.26 | 0 | 0 | 0 | 0 | 0 | 0 |
14 | 0 | 0 | 0 | 6 | 0 | 0.46 | 0 | 0 | 0 |
17 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
18 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
24 | 6 | 1.55 | 2.40 | 0 | 0 | 0 | 0 | 0 | 0 |
(B) MD2, TRAIT 1, 10% G, 30% E CODED AS MISSING | |||||||||
3 | 0 | 0 | 0.23 | 0 | 0 | 0 | 0 | 0 | 0 |
6 | 0 | 0.24 | 0.20 | 0 | 0 | 0 | 0 | 0 | 0 |
9 | 0 | 0 | 0.39 | 0 | 0 | 0 | 0 | 0 | 0 |
14 | 0 | 0 | 0 | 6 | 0.63 | 2.58 | 0 | 0 | 0 |
17 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
24 | 6 | 1.38 | 2.38 | 0 | −0.21 | −0.23 | 0 | 0 | 0 |
A bold font is used to indicate positions where the true or estimated effect was non-zero. The shaded cells indicate false positives and false negatives.