Table 1.
Sample | Uniquely Mapped Reads: Replicate 1 |
Uniquely Mapped Reads: Replicate 2 |
Total Uniquely Mapped Reads |
modENCODE/NCBI-SRA Accession Numbers |
---|---|---|---|---|
Third instar larvae, CNS | 12,921,055 | 40,022,667 | 52,943,722 | modENCODE_3466 SRR070409, SRR070410 |
Pupae, white pre-pupae + 2 days, CNS | 44,833,331 | 37,635,655 | 82,468,986 | modENCODE_3469 SRR100271, SRR070412 |
Mated female, eclosion + 4 days, heads | 59,341,425 | 60,448,967 | 119,790,392 | modENCODE_3448 SRR070414, SRR070415 |
Mated male, eclosion + 4 days, heads | 54,635,860 | 54,555,328 | 109,191,188 | modENCODE_3449 SRR070416, SRR070400 |
Mated female, eclosion + 4 days, ovaries | 62,102,229 | 168,912,884 | 231,015,113 | modENCODE_3451 SRR070431, SRR100277, SRR100283 |
Mated male, eclosion + 4 days, testes | 249,972,580 | 171,471,971 | 421,444,551 | modENCODE_3452 SRR070422, SRR350960, SRR070423, SRR100276, SRR350961 |
S2-R+ | 55,121,051 | N/A | 55,121,051 | modENCODE_3487 SRR070279, SRR124149, SRR070266 |
Total | 538,927,531 | 533,047,472 | 1,071,975,003 |
Details on RNA-seq data sets produced for this study. All the raw sequences reads and mapping files can be obtained under the designated accession numbers from the modENCODE Data Coordination Center (http://www.modencode.org/publications/dcc/index.shtml) and the NCBI Short Read Archive (http://www.ncbi.nlm.nih.gov/sra/).