Table 1.

Experimental Design

	NZO_SD	NZO_HF	SJL_SD	SJL_HF
Exp 1	mouse:1 - channel:114	mouse:4 - channel:117	mouse:7 - channel:116	mouse:10 - channel:115
Exp 2	mouse:2 - channel:115	mouse:5 - channel:114	mouse:8 - channel:116	mouse:11 - channel:117
Exp 3	mouse:3 - channel:116	mouse:6 - channel:115	mouse:9 - channel:117	mouse:12 - channel:114

Experimental design and iTRAQ labeling (114 - 117) for three experimental replications (Exp 1, Exp 2 and Exp 3). For every distinct combination of genotype and diet 3 different mouse individuals are used.