Table 1. List of bacterial strains used in this study.
Strain | Strain tag | Strain origin/characteristic relevant for this study (year of strain isolation) | Reference/source |
Wild-type: | |||
S. Typhimurium SL1344 | Thm1 | Bovine | [96] |
S. Typhimurium 1 (RKS4194) | Thm2 | Human, England | [97] |
S. enterica serogroup B C-24 | Thm5 | Human stool, recurrent gastroenteritis/typhoid fever, (2007) * | F. Fang1 |
S. Pomona DMSO63 | Pom1 | Unknown | [98] |
S. Anatum DMSO13 | Ant1 | Unknown | [98] |
S. Dublin DMSO30 | Dub1 | Unknown | [98] |
S. Dublin C-29 | Dub2 | Human blood, colitis/sepsis, (2011) | F. Fang |
S. Dublin 10351 | Dub3 | Bovine (necropsy) (2006) | M. Samadpour2 |
S. Dublin 11170 | Dub4 | Bovine spleen (2006) | M. Samadpour |
S. Dublin 11087 | Dub5 | Bovine lung (2006) | M. Samadpour |
S. Dublin 10928 | Dub6 | Bovine feces (2006) | M. Samadpour |
S. Dublin 10828 | Dub7 | Bovine necropsy (2006) | M. Samadpour |
S. Mississippi DMSO49 | Msp1 | Unknown | [98] |
S. Agona DMSO09 | Ago1 | Unknown | [98] |
S. Newport DMSO55 | New1 | Unknown | [98] |
S. Pullorum SL297 | Pul1 | Unknown | [98] |
S. Paratyphi B S66 | PaB1 | Unknown | [74] |
S. Paratyphi B S957 | PaB2 | Unknown | [74] |
S. Paratyphi B 2421 | PaB3 | Unknown | S. Clegg3 |
S. ParatyphiB var java DMSO45 | PaB-j1 | Unknown | [98] |
S. Enteritidis 11122-1 | Ent1 | Avian | M. Samadpour |
S. Enteritidis 12154-1 | Ent2 | Bovine (environmental) | M. Samadpour |
S. Choleraesuis χ3246 | Chl1 | Porcine | [99] |
S. Choleraesuis 10411-1 | Chl2 | Bovine lung (necropsy) | M. Samadpour |
S. Choleraesuis 11175-1 | Chl3 | Porcine lung (necropsy) | M. Samadpour |
S. Choleraesuis 11359-1 | Chl4 | Porcine (necropsy) | M. Samadpour |
S. Choleraesuis 1656/04 | Chl5 | Porcine | M. Ugorski4 |
S. Choleraesuis 1500/05 | Chl6 | Porcine | M. Ugorski |
S. Typhi 63 (RKS3333) | Typ1 | Dakar | [100] |
S. Typhi 64 (RKS3320) | Typ2 | Dakar | [100] |
S. Typhi C-23 | Typ3 | Human blood, typhoid fever (2002) | F. Fang |
S. Typhi Ty2 (JSG624) | Typ4 | Unknown | J. Gunn5 |
S. Paratyphi A 42 (RKS4993) | PaA1 | Laboratory strain (ATCC 9150) | [100] |
S. Sendai 58 (RKS2866) | Sen1 | Human, California | [100] |
S. Limete 47 (RKS3215) | Lim1 | Human, Africa | [100] |
S. Indiana 25 (RKS4250) | Ind1 | Scotland | [100] |
S. Muenchen 32 (RKS3121) | Mun1 | Laboratory strain (ATCC 8388) | [100] |
S. Montevideo 30 (RKS1762) | Mon1 | Human, Georgia | [100] |
S. Montevideo 31 (RKS 1740) | Mon2 | Human, Florida | [100] |
S. Wien 71 (RKS4000) | Wie1 | Human, France | [100] |
S. Poona MI14a | Poa1 | Marine Iguana, S. Plaza, Galapagos | R.I. Mackie6 |
S. Panama LI03e | Pan1 | Land Iguana, S. Plaza, Galapagos | R.I. Mackie |
S. Sandiego MI08d | San1 | Marine Iguana, S. Plaza, Galapagos | R.I. Mackie |
S. Sandiego LI23b | San2 | Land Iguana, Santa Fe, Galapagos | R.I. Mackie |
S. Sandiego LI010a | San3 | Land Iguana, S. Plaza, Galapagos | R.I. Mackie |
S. enterica subsp. II (RKS 2993) | 2993 | Unknown | [97] |
S. enterica subsp. IIIa (RKS 2980) | 2980 | Corn snake, Oregon | [97] |
S. enterica subsp. IIIa (RKS 2983) | 2983 | Human, California | [97] |
S. enterica subsp. IIIb (RKS 2978) | 2978 | Human, Oregon | [97] |
S. enterica subsp. IIIb (RKS 2979) | 2979 | Human, California | [97] |
S. enterica subsp. IV (RKS 3015) | 3015 | Animal, Canal zone | [97] |
S. enterica subsp. IV (RKS 3027) | 3027 | Human, Illinois | [97] |
S. enterica subsp. IV (RKS 3013) | 3013 | Tonga-T1 | [97] |
S. enterica subsp. IV (RKS 3014) | 3014 | Human, Florida | [97] |
S. enterica subsp. VI (RKS 2995) | 2995 | India | [97] |
S. enterica subsp. VI (RKS 3057) | 3057 | Unknown | [97] |
Recombinant: | [97] | ||
S. Typhimurium SL1344H3 | - | fimH::kan mutant of S. Typhimurium SL1344 | [38] |
S. Typhimurium LBH4 | - | fimH::kan mutant of S. Typhimurium LB5010 | [101] |
S. Typhi Ty57 | Typ4 | aroA::kan mutant of S. Typhi Ty2 | This study |
Harborview Medical Center, Seattle, WA, USA.
Institute for Environmental Health, Lake Forest Park, WA, USA.
University of Iowa, Iowa City, IA, USA.
Wroclaw University of Environmental and Life Sciences, Wroclaw, Poland.
Ohio State University, Columbus, OH, USA.
University of Illinois, Urbana, IL, USA.