Table 3.
Section | No. of genus-level taxab | No. of phylotypes |
Diversity indexc |
|||
---|---|---|---|---|---|---|
5% | 3% | Expected phylotypesd | Diversitye | Evennessf | ||
Crop | 298 | 351 | 563 | 1,174 | 3.39 | 0.45 |
Midgut | 217 | 285 | 511 | 1,231 | 1.54 | 0.20 |
ms/P1 | 187 | 195 | 337 | 944 | 2.80 | 0.38 |
P3 | 264 | 360 | 653 | 1,626 | 2.42 | 0.31 |
P4 | 307 | 411 | 726 | 1,748 | 3.87 | 0.50 |
P5 | 173 | 167 | 275 | 494 | 3.77 | 0.57 |
The number of taxa (hierarchical classification to genus level) is compared to the number of phylotypes (similarity-based classification, using a 3% or 5% dissimilarity threshold).
Lowest level of classification.
Diversity indices are based on 3% dissimilarity.
Chao1 estimator (14).
Nonparametric Shannon index (15).
Evenness was calculated as described elsewhere (34).