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. 2012 May 23;68(Pt 6):647–651. doi: 10.1107/S1744309112013267

Table 2. Quality statistics for SAD phasing using SeMet MmBag2(21103) and initial model building.

SAD phasing and model building
No. of Se atoms in protein 5
No. of protein copies in asymmetric unit 2
No. of placed Se atoms 8
Figure of merit 0.373
No. of residues built 98
Bayesian map correlation coefficient 0.72
Final No. of residues built and refined§ 138
Final R work/R free 0.319/0.363
Molecular-replacement statistics
No. of protein copies in asymmetric unit 8
Translation-function Z score (TFZ) 29.2
No. of C clashes (PAK) 0
Log-likelihood gain (LLG) 1469

Number of residues built by the PHENIX AutoBuild wizard out of 166 theoretically possible residues.

Bayesian estimate of map quality determined by the PHENIX AutoSol wizard (Terwilliger et al., 2009).

§

Total number of residues, out of a theoretically possible 166 residues, built by a combined effort of automated building by PHENIX (Adams et al., 2010) followed by manual rebuilding in Coot (Emsley et al., 2010).

Scores for the best Phaser (McCoy et al., 2007) molecular-replacement solution using the model built from the 3.1 resolution SAD data set.